Gene detail

Detailed information of PFX17743.1 in Stylophora pistillata

Genomic Location: Spis.scaffold452:146429...161416
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11957 all species →	efThoc1	THO complex subunit 1 transcription elongation factor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021861 all species →	Family	THO complex, subunit THOC1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13265 all species →	THO COMPLEX SUBUNIT 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000445 all species →	Cellular Component	THO complex part of transcription export complex	Interproscan
GO:0006406 all species →	Biological Process	mRNA export from nucleus	Interproscan
GO:0032784 all species →	Biological Process	regulation of DNA-templated transcription elongation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12878	THOC1; THO complex subunit 1	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.