Genomic Location: Spis.scaffold411:113168...146484
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families
| CDS |
| Pkd1l2 |
| Transcript |
| rna-Spis17202_mrna |
| Protein |
| PFX18429.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01825 all species → | GPS | GPCR proteolysis site, GPS, motif | Motif | Interproscan |
| PF13385 all species → | Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily | Domain | Interproscan |
| PF01822 all species → | WSC | WSC domain | Domain | Interproscan |
| PF01477 all species → | PLAT | PLAT/LH2 domain | Domain | Interproscan |
| PF08016 all species → | PKD_channel | Polycystin cation channel | Family | Interproscan |
| PF20519 all species → | Polycystin_dom | Polycystin domain | Domain | Interproscan |
| PF00088 all species → | Trefoil | Trefoil (P-type) domain | Domain | Interproscan |
| PF12248 all species → | Methyltransf_FA | Farnesoic acid 0-methyl transferase | Family | Interproscan |
| PF00754 all species → | F5_F8_type_C | F5/8 type C domain | Domain | Interproscan |
| PF00801 all species → | PKD | PKD domain | Domain | Interproscan |
| PF02010 all species → | REJ | REJ domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000601 all species → | Domain | PKD domain | Interproscan |
| IPR002889 all species → | Domain | Carbohydrate-binding WSC | Interproscan |
| IPR022409 all species → | Domain | PKD/Chitinase domain | Interproscan |
| IPR000519 all species → | Domain | P-type trefoil domain | Interproscan |
| IPR000203 all species → | Conserved_site | GPS motif | Interproscan |
| IPR051223 all species → | Family | Polycystin | Interproscan |
| IPR035986 all species → | Homologous_superfamily | PKD domain superfamily | Interproscan |
| IPR001024 all species → | Domain | PLAT/LH2 domain | Interproscan |
| IPR000421 all species → | Domain | Coagulation factor 5/8 C-terminal domain | Interproscan |
| IPR044913 all species → | Homologous_superfamily | P-type trefoil domain superfamily | Interproscan |
| IPR013122 all species → | Domain | Polycystin cation channel, PKD1/PKD2 | Interproscan |
| IPR046791 all species → | Domain | Polycystin domain | Interproscan |
| IPR003915 all species → | Family | Polycystic kidney disease type 2 protein | Interproscan |
| IPR013320 all species → | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR008979 all species → | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR022041 all species → | Domain | Farnesoic acid O-methyl transferase | Interproscan |
| IPR036392 all species → | Homologous_superfamily | PLAT/LH2 domain superfamily | Interproscan |
| IPR002859 all species → | Domain | PKD/REJ-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10877 all species → | POLYCYSTIN FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005262 all species → | Molecular Function | calcium channel activity | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0050982 all species → | Biological Process | detection of mechanical stimulus | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005509 all species → | Molecular Function | calcium ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K04988 | PKD1L2; polycystin 1L2 | - | Ion channels | ko04040 | deepkoala |
