Gene detail

Detailed information of PFX19132.1 in Stylophora pistillata

Genomic Location: Spis.scaffold375:66610...79776
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

STIL

ATGGACAGGCAAACAGTGGACCAACTGTCATCATTTTTTCCTTCTAAGAGAGATAAATACAACGAAGAACAGAATTACTTAAGAATGCAGAGAAATGGTGTTGCCCTTCAGCCCCTGAATTTCCCTGTAACTCGGTCGATACTGTGGAACAGAACTGCTCAAGGGGACACTGAAACTCTTCATCTTACAACAAAAAGGAATGTGAGGTTGTATATCAATGAAAAGACCCTGCATCTGGCTCGCAGACATGCCAATCAAAACAAGTCTTCCAGTGAATGTTTCCTTGTCGGAAGCGTCTCAGTTGACTCAAAAGAGGACAGCATTGATGTTACTGTGGACAGATTTGATCCAGGTAGAGAAGTCATGATCAAACAGGGTACTGGAAAAGTCAAAAGGAAAGTTCCCACTACAGTTGTTCCTGGAGACCACATTGTGCCAATCACTGTCCAGTTTGGTAGGATCAGCAGCCAAGAAACTGTGAGTCTGTCACACCTTGTGAGCTTGAAGGTCTGCTGTCAGTCACACGGTGATGATGATGAGATCATAATTAACGTCAACTGTGGTGCCATTGCCATGGGAACAAAAATATGTGCCACTCCTGTAGTAGCTGTACCCATCATTCCAACAGCACTGGCCAGAAATTTGTCAGGTCCACTAAGACTTAGTGAGGTTCAAGGTGTACCGAAATGTGGATATTTGACCATGGATCACACCAGGAAATTACTGTTGCTGCTTGAATCTGATCCAAAGGCAGTTTCTTTACCACTTCTTGGAATGGTGTTTGCCCCTCCAGATTCCTTCCTACTTCTGTTGTATTCACCTGTGAAGAGTACACCAGAGTTCTGGGAATGCCGACAAGATCAGCCACTTGGTTCCAGTTCTACTGAGCCATTGTGCTTTGAGCTGTTTCCAGCCCCTGAGGGACTGGGAAGAAGTCTTTTTGAGCAAGCCGTGAATGACTGGGAGAAAGAACAAAGAACAATGAGGTTTGGTGGAGATGAAGATCTTTCTTCCAGAAACCAACCTGTCCCTCCAATGTGGAAAGGGCCTGAGGAAGAGGAATTCACTCCAGTTCCCAGACCCTCTCCATCTCCTCATCCTCAAAACTTCCAGCTTGTGCTTCCAGAAGTAGCTAAGACATCTTTGTCTCTGAGCTTCGATGAGCAGGCTACAGTTGATACTCCAGAACAGGGCTTTGCATATCAGAAAATTCTACCCAATCCAAAACATATGCATCATCCAAAATCTCAGAGTCAACAAGACCAAGAAAATAATCATACAAATAGAATCAGTTCTGCAGGCCTATTAAAAGCGAAAAACCCAGCTACAAAGAACAGCAGAGCAGTGAAATCTTCTGACACTCAGAATTCACCATCAAGAGAACCATTGAGGCCAATATTAGCTCCAAATCAAACTCAATCAAGGGTACTGAAGCAAAAACAAATTCATCCACAATTACCTCAGAAAAGTAAGCTATCCCAAGGCATGGTTCAATCAGTTTCCACTCAGAGGGTAACTAGTGCAGTACATCATGCACATCAGAGACCACAGCATGCTCTTCCAGACACTGCTACTGACAAGTCTAAAAGAGATGGAAAACAAGTATTCTCTAAGCAAGTGGATGTTGTTCAGAAAATTGAATTAGGGAAAGTTAAACACACAGACAGCACAAATCATTTCATGGTAGCCAAACCTAAAGGCTCAAAAAGTGCAGACAAGGAAAACTTGCACAGTTTTACAGGACAGTGTAAGGTTTCTCCAAAGCACAAAGCTGAAGGAAACAAAGAAACAAAGTTTGACTTGCCATCTATTAGACCAGCAGATAACAGTAACAATCCAACATCAGTACACCAAATTCAAAAGCCTTGTTTGGAGACAGTTTATGAAGGAGAAACCCTAGATGGAACTTTGAATCAAAGTATGGGTGAAACGGAACTACAACTTCAAATTAAAGAGGAAAGCTCCCCCACACATGGCAATTTTAGTTTGTTTTCATGTCATTCTCAAAAGGGTACAAGCTGTGCAAATAATGAATTTCTCAGGGAAGGAAATACTGGTCTTGTAGTGGATGAATATGAAGGAACAGTGCCGGGAAATGTACAAGAACAGAGAAGTATTAATTTTCATTCTCCAGACAGCGGAGAACAAGTTTTTAAAGACTTTACTTCAGGTTCTGTGTCAAGTGAGATTGTACCCCTGCAATCTCAGGAGAAAGGAGGGCAGACATCAGAAGCTAATGAAGAGAACCCTGACATCCAAAAGCATCAACAATTATTTAAGGAAGATGTGCAGGTTGTAGGAAATGTTACCACAAAGAAAAGAATGGAGAGTTCTATGTCAGCAGAAGGGTCACCCCTCCCTGATCCTTACCAACTTCTTATGAGACAAGAAGCTCAGCTAAGAGAACTTCAAGAACAGATCAAGCTTCTACTGCAGCAACAAAATGCTCAACTTCTTCCTGCTCCCAATGCATTACTCACTCCTCCCAGATCTCCTCATTTGGAAAGTTGTTATGGCAACAACAGATCACCTGACCCCTCTCCCATCTCAATGGTTACAGCATGTACAAACACTGGTGCAAGTCTGCTACTTGGAACACCTGTGAAGCTTAACAGCAAGAGATCAGCTGCTACATCACCAATAAAGGAAAAGGACTTGAATCAGAATAGAAGAGCTTTGTCAACTTCAAGTGAATTTGTCAGTGAGATGAACTTGCAGGCAGGCCAGCCAAACTCTAAACAGTTACACAGGTCTACCAATCCTGATGAATTAGCAAATCAGGTGATAGAGATTGATGACCCTAGTCAAACATTAGCTTCTTCTCTTCATGCTGTGGACATCCCAAGCTTTGTTGATAGTCCTTCAGGCGTGACTAGCCCCAGTTCTAATGCTTGCACTGAAGGAGGAGGCATGGAAACAAGTCTCACAAGTCCTATGTTAGGTCAAGAAGACCACACCCCAGAAGACTCTTCTCAGAAATCTGATCTCAAAGAACCTGCCACACCTTATTATGCCACACGAGAAGAAGTTGTTATGGCAACAGTGGGTGAGTTGGAAAAGTTGAAGGCCTCACCTCCTGGAACTAAAGATGGACCTACAGAGAACCATGTCAGCACTTTCCCCAAACAATGGCCATTCCACAGATCAGCATCACTGAGCATTATACCAGATCATCCTCGCATTAACTACTTGTCACTATCTGTTGATGACACACTTGATGAAGTTTTCAGTGAAGCAGACTTCAAATACCTAACTGATGATCAACAACAGGAGCTTCAAAAAATCAACAGTCATGGCAAAAGCCACAGCCGCCAAAGAGCTGTTACTTTTGACAATGATATTTCTCGATCTCCCATGGACTATACTTGGAATAACTTATCCATGGCTACCCAGCAGTACTTGGGAAAGTACTGCTTAGCTCCTAAACATCCCGATGGGCTAACTAAGGCCAGGAAAACAAAAGGAATTTCCAGTAGTGATTCTGGCCTCTTGAATTCTGAAACATTCCAAGGGTGTAAGGCACCACCTCCTACTCCAGAGCCCACCTCCAAAGAGGAAAATACTTCAAATATTCTAGACATCACCAGGCTGAAAAAGCTACCCAAGTTAATTTGA

Transcript

rna-Spis16457_mrna

ATGGACAGGCAAACAGTGGACCAACTGTCATCATTTTTTCCTTCTAAGAGAGATAAATACAACGAAGAACAGAATTACTTAAGAATGCAGAGAAATGGTGTTGCCCTTCAGCCCCTGAATTTCCCTGTAACTCGGTCGATACTGTGGAACAGAACTGCTCAAGGGGACACTGAAACTCTTCATCTtacaacaaaaagGAATGTGAGGTTGTATATCAATGAAAAGACCCTGCATCTGGCTCGCAGACATGCCAATCAAAACAAGTCTTCCAGTGAATGTTTCCTTGTCGGAAGCGTCTCAGTTGACTCAAAAGAGGACAGCATTGATGTTACTGTGGACAGATTTGATCCAGGTAGAGAAGTCATGATCAAACAGGGTACTGGAAAAGTCAAAAGGAAAGTTCCCACTACAGTTGTTCCTGGAGACCACATTGTGCCAATCACTGTCCAGTTTGGTAGGATCAGCAGCCAAGAAACTGTGAGTCTGTCACACCTTGTGAGCTTGAAGGTCTGCTGTCAGTCACACGGTGATGATGATGAGATCATAATTAACGTCAACTGTGGTGCCATTGCCATGGGAACAAAAATATGTGCCACTCCTGTAGTAGCTGTACCCATCATTCCAACAGCACTGGCCAGAAATTTGTCAGGTCCACTAAGACTTAGTGAGGTTCAAGGTGTACCGAAATGTGGATATTTGACCATGGATCACACCAGGAAATTACTGTTGCTGCTTGAATCTGATCCAAAGGCAGTTTCTTTACCACTTCTTGGAATGGTGTTTGCCCCTCCAGATTCCTTCCTACTTCTGTTGTATTCACCTGTGAAGAGTACACCAGAGTTCTGGGAATGCCGACAAGATCAGCCACTTGGTTCCAGTTCTACTGAGCCATTGTGCTTTGAGCTGTTTCCAGCCCCTGAGGGACTGGGAAGAAGTCTTTTTGAGCAAGCCGTGAATGACTgggagaaagaacaaagaacaatGAGGTTTGGTGGAGATGAAGATCTTTCTTCCAGAAACCAACCTGTCCCTCCAATGTGGAAAGGGCCTGAGGAAGAGGAATTCACTCCAGTTCCCAGACCCTCTCCATCTCCTCATCCTCAAAACTTCCAGCTTGTGCTTCCAGAAGTAGCTAAGACATCTTTGTCTCTGAGCTTCGATGAGCAGGCTACAGTTGATACTCCAGAACAGGGCTTTGCATATCAGAAAATTCTACCCAATCCAAAACATATGCATCATCCAAAATCTCAGAGTCAACAAGACCAAGAAAATAATCATACAAATAGAATCAGTTCTGCAGGCCTATTAAAAGCGAAAAACCCAGCTACAAAGAACAGCAGAGCAGTGAAATCTTCTGACACTCAGAATTCACCATCAAGAGAACCATTGAGGCCAATATTAGCTCCAAATCAAACTCAATCAAGGGTActgaagcaaaaacaaattcatCCACAATTACCTCAGAAAAGTAAGCTATCCCAAGGCATGGTTCAATCAGTTTCCACTCAGAGGGTAACTAGTGCAGTACATCATGCACATCAGAGACCACAGCATGCTCTTCCAGACACTGCTACTGACAAGTCtaaaagagatggaaaacaaGTATTCTCTAAGCAAGTGGATGTTGTTCAGAAAATTGAATTAGGGAAAGTTAAACACACAGACAGCACAAATCATTTCATGGTAGCCAAACCTAAAGGCTCAAAAAGTGCAGACAAGGAAAACTTGCACAGTTTTACAGGACAGTGTAAGGTTTCTCCAAAGCACAAAGctgaaggaaacaaagaaacaaagtttgACTTGCCATCTATTAGACCAGCAGATAACAGTAACAATCCAACATCAGTACACCAAATTCAAAAGCCTTGTTTGGAGACAGTTTATGAAGGAGAAACCCTAGATGGAACTTTGAATCAAAGTATGGGTGAAACGGAACTACAACttcaaattaaagaggaaaGCTCCCCCACACATggcaattttagtttgttttcatgtCATTCTCAAAAGGGTACAAGCTGTGCAAATAATGAATTTCTCAGGGAAGGAAATACTGGTCTTGTAGTGGATGAATATGAAGGAACAGTGCCGGGAAATGTACAAGAACAGAGAAGTATTAATTTTCATTCTCCAGACAGCGGAGAACAAGTTTTTAAAGACTTTACTTCAGGTTCTGTGTCAAGTGAGATTGTACCCCTGCAATCTCAGGAGAAAGGAGGGCAGACATCAGAAGCTAATGAAGAGAACCCTGACATCCAAAAGCATCAACAATTATTTAAGGAAGATGTGCAGGTTGTAGGAAATGTTACCACAAAGAAAAGAATGGAGAGTTCTATGTCAGCAGAAGGGTCACCCCTCCCTGATCCTTACCAACTTCTTATGAGACAAGAAGCTCAGCTAAGAGAACTTCAAGAACAGATCAAGCTTCTACTGCAGCAACAAAATGCTCAACTTCTTCCTGCTCCCAATGCATTACTCACTCCTCCCAGATCTCCTCATTTGGAAAGTTGTTATGGCAACAACAGATCACCTGACCCCTCTCCCATCTCAATGGTTACAGCATGTACAAACACTGGTGCAAGTCTGCTACTTGGAACACCTGTGAAGCTTAACAGCAAGAGATCAGCTGCTACATCACCAATAAAGGAAAAGGACTTGAATCAGAATAGAAGAGCTTTGTCAACTTCAAGTGAATTTGTCAGTGAGATGAACTTGCAGGCAGGCCAGCCAAACTCTAAACAGTTACACAGGTCTACCAATCCTGATGAATTAGCAAATCAGGTGATAGAGATTGATGACCCTAGTCAAACATTAGCTTCTTCTCTTCATGCTGTGGACATCCCAAGCTTTGTTGATAGTCCTTCAGGCGTGACTAGCCCCAGTTCTAATGCTTGCACTGAAGGAGGAGGCATGGAAACAAGTCTCACAAGTCCTATGTTAGGTCAAGAAGACCACACCCCAGAAGACTCTTCTCAGAAATCTGATCTCAAAGAACCTGCCACACCTTATTATGCCACACGAGAAGAAGTTGTTATGGCAACAGTGGGTGAGTTGGAAAAGTTGAAGGCCTCACCTCCTGGAACTAAAGATGGACCTACAGAGAACCATGTCAGCACTTTCCCCAAACAATGGCCATTCCACAGATCAGCATCACTGAGCATTATACCAGATCATCCTCGCATTAACTACTTGTCACTATCTGTTGATGACACACTTGATGAAGTTTTCAGTGAAGCAGACTTCAAATACCTAACTGATGATCAACAACAGGAGCTTCAAAAAATCAACAGTCATGGCAAAAGCCACAGCCGCCAAAGAGCTGTTACTTTTGACAATGATATTTCTCGATCTCCCATGGACTATACTTGGAATAACTTATCCATGGCTACCCAGCAGTACTTGGGAAAGTACTGCTTAGCTCCTAAACATCCCGATGGGCTAACTAAGGCCAGGAAAACAAAAGGAATTTCCAGTAGTGATTCTGGCCTCTTGAATTCTGAAACATTCCAAGGGTGTAAGGCACCACCTCCTACTCCAGAGCCCACCTCCAAAGaggaaaatacttcaaatatTCTAGACATCACCAGGCTGAAAAAGCTACCCAAGTTAATTTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15253 all species →	STIL_N	SCL-interrupting locus protein N-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026123 all species →	Family	SCL-interrupting locus protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15128 all species →	TAL1 SCL INTERRUPTING LOCUS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0007052 all species →	Biological Process	mitotic spindle organization	Interproscan
GO:0007224 all species →	Biological Process	smoothened signaling pathway	Interproscan
GO:0051298 all species →	Biological Process	centrosome duplication	Interproscan
GO:0071539 all species →	Biological Process	protein localization to centrosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16724	STIL; SCL-interrupting locus protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.