Gene detail

Detailed information of PFX19549.1 in Stylophora pistillata

Genomic Location: Spis.scaffold355:77157...79417
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007516 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02792 all species →	Mago_nashi	Mago nashi protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004023 all species →	Family	Mago nashi protein	Interproscan
IPR036605 all species →	Homologous_superfamily	Mago nashi superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12638 all species →	PROTEIN MAGO NASHI HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008380 all species →	Biological Process	RNA splicing	Interproscan
GO:0035145 all species →	Cellular Component	exon-exon junction complex	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0071013 all species →	Cellular Component	catalytic step 2 spliceosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12877	MAGOH; protein mago nashi	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.