Detailed information of PFX20380.1 in Stylophora pistillata

Genomic Location: Spis.scaffold319:116510...150386
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01979
all species →
Amidohydro_1Amidohydrolase familyDomainInterproscan
PF02142
all species →
MGSMGS-like domainDomainInterproscan
PF00117
all species →
GATaseGlutamine amidotransferase class-IDomainInterproscan
PF02787
all species →
CPSase_L_D3Carbamoyl-phosphate synthetase large chain, oligomerisation domainDomainInterproscan
PF00988
all species →
CPSase_sm_chainCarbamoyl-phosphate synthase small chain, CPSase domainDomainInterproscan
PF00185
all species →
OTCaceAspartate/ornithine carbamoyltransferase, Asp/Orn binding domainDomainInterproscan
PF02729
all species →
OTCace_NAspartate/ornithine carbamoyltransferase, carbamoyl-P binding domainDomainInterproscan
PF02786
all species →
CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006275
all species →
FamilyCarbamoyl-phosphate synthase, large subunitInterproscan
IPR002082
all species →
FamilyAspartate carbamoyltransferaseInterproscan
IPR006680
all species →
DomainAmidohydrolase-relatedInterproscan
IPR036901
all species →
Homologous_superfamilyAspartate/ornithine carbamoyltransferase superfamilyInterproscan
IPR011607
all species →
DomainMethylglyoxal synthase-like domainInterproscan
IPR036897
all species →
Homologous_superfamilyCarbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamilyInterproscan
IPR036480
all species →
Homologous_superfamilyCarbamoyl-phosphate synthase small subunit, N-terminal domain superfamilyInterproscan
IPR017926
all species →
DomainGlutamine amidotransferaseInterproscan
IPR035686
all species →
DomainCarbamoyl-phosphate synthase small subunit, GATase1 domainInterproscan
IPR006274
all species →
FamilyCarbamoyl-phosphate synthase, small subunitInterproscan
IPR006130
all species →
FamilyAspartate/ornithine carbamoyltransferaseInterproscan
IPR005480
all species →
DomainCarbamoyl-phosphate synthetase, large subunit oligomerisation domainInterproscan
IPR002474
all species →
DomainCarbamoyl-phosphate synthase small subunit, N-terminal domainInterproscan
IPR029062
all species →
Homologous_superfamilyClass I glutamine amidotransferase-likeInterproscan
IPR011761
all species →
DomainATP-grasp foldInterproscan
IPR002195
all species →
Conserved_siteDihydroorotase, conserved siteInterproscan
IPR006131
all species →
DomainAspartate/ornithine carbamoyltransferase, Asp/Orn-binding domainInterproscan
IPR005479
all species →
DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR016185
all species →
Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR011059
all species →
Homologous_superfamilyMetal-dependent hydrolase, composite domain superfamilyInterproscan
IPR006132
all species →
DomainAspartate/ornithine carbamoyltransferase, carbamoyl-P bindingInterproscan
IPR032466
all species →
Homologous_superfamilyMetal-dependent hydrolaseInterproscan
IPR036914
all species →
Homologous_superfamilyMethylglyoxal synthase-like domain superfamilyInterproscan
IPR013815
all species →
Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR005483
all species →
DomainCarbamoyl-phosphate synthase large subunit, CPSase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11405
all species →
CARBAMOYLTRANSFERASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006807
all species →
Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0004070
all species →
Molecular Functionaspartate carbamoyltransferase activityInterproscan
GO:0006207
all species →
Biological Process'de novo' pyrimidine nucleobase biosynthetic processInterproscan
GO:0016787
all species →
Molecular Functionhydrolase activityInterproscan
GO:0006520
all species →
Biological Processamino acid metabolic processInterproscan
GO:0016597
all species →
Molecular Functionamino acid bindingInterproscan
GO:0016743
all species →
Molecular Functioncarboxyl- or carbamoyltransferase activityInterproscan
GO:0004088
all species →
Molecular Functioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activityInterproscan
GO:0004151
all species →
Molecular Functiondihydroorotase activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0006228
all species →
Biological ProcessUTP biosynthetic processInterproscan
GO:0006541
all species →
Biological Processglutamine metabolic processInterproscan
GO:0019240
all species →
Biological Processcitrulline biosynthetic processInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan
GO:0016812
all species →
Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidesInterproscan
GO:0016810
all species →
Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bondsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11540CAD; carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotaseEC:6.3.5.5
EC:2.1.3.2
EC:3.5.2.3
Peptidases and inhibitorsko01002deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP