Gene detail

Detailed information of PFX20502.1 in Stylophora pistillata

Genomic Location: Spis.scaffold314:273999...285389
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04180 all species →	LTV	Low temperature viability protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007307 all species →	Family	Low temperature viability protein Ltv1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21531 all species →	LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000056 all species →	Biological Process	ribosomal small subunit export from nucleus	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0030688 all species →	Cellular Component	preribosome, small subunit precursor	Interproscan
GO:0042274 all species →	Biological Process	ribosomal small subunit biogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14798	LTV1; protein LTV1	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.