Detailed information of PFX20816.1 in Stylophora pistillata

Genomic Location: Spis.scaffold302:123337...134965
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01049
all species →
CADH_Y-type_LIRCadherin, Y-type LIR-motifFamilyInterproscan
PF00028
all species →
CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015919
all species →
Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126
all species →
DomainCadherin-likeInterproscan
IPR020894
all species →
Conserved_siteCadherin conserved siteInterproscan
IPR000233
all species →
DomainCadherin, Y-type LIR-motifInterproscan
IPR027397
all species →
Homologous_superfamilyCatenin binding domain superfamilyInterproscan
IPR039808
all species →
FamilyCadherinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027
all species →
CADHERIN-23Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0007156
all species →
Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007155
all species →
Biological Processcell adhesionInterproscan
GO:0016342
all species →
Cellular Componentcatenin complexInterproscan
GO:0045296
all species →
Molecular Functioncadherin bindingInterproscan
GO:0098609
all species →
Biological Processcell-cell adhesionInterproscan
GO:0098742
all species →
Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16507DCHS1_2, PCDH16_23; protocadherin-16/23-Cell adhesion moleculesko04515deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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