Gene detail

Detailed information of PFX21231.1 in Stylophora pistillata

Genomic Location: Spis.scaffold285:243022...259189
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

usp15

ATGCAAACTGGTGAAAGTCGCATAATGAACCCCACCACCCACCAGACAGTTGTCTGGTTTTGCATAAACAACTTTGCTGTTGCCAAGCCCCACTCATCTAAACGTTACGAAAGTATACCTTTCGATAATTTACTTTTCAACATGGCCGGCGTGAATGACAACAGTAATCCAATCGAGTCTTCACCAGATGTAGAGACTCAGAGAAAGGAAATAGCAAAGGCTATGAAGAGGCCTTTCGTTAAGGGTGATATCTGGTATCTTGTGGATAGTTGCTGGTTTAAGCAGTGGAAGAAGGTTACTGGGTATGATTCACAGGATAAAGCTGATGAAGGAAAAGAATTCAATTATCCAGGTCCTATAGATAATACAAGTCTTTTTGAAGCTGATGGCTGCACTCTGAAAGAAAATCTCATTGATGAGCTTGATTACAACCTGCTCACAAAAGACTCGTGGTTGAAACTTGTATCATGGTATGGAATTAGTTCACACCAGCAGACTCTTGCCAGAAAGGTTGTGGAATATGGAAAGTATCTCAAATACCTTAAGGTTGAAGTCTACCTCATTGCTTTGAAACTTTTCAAATGCTCAGAACCCCAGATGTTTGTTACAAGGCTCTTCAGTAGGAGAGATACTGTGGGTCATGTTGTGTCAGAGATGAAAAAAGTCTTTAGCATACCAGAAGATGCTGAAACAGAAGTGTGGTGGAACAAGGGCTACCTTACATATGAGCTTCTCGATAATTTGAGATGCGCTGTGGAAAATGCTGGCCGTTATCATGGAGAGGTTCAAACTTGGAAGTACGTTGATGACACGACGGTGTCAGAGATCGTCCCGCGCAATGCATCAGGTGACGCCCAAAACGCTGTCAATGTCGTGGAGGATTGGTCCAAAGCACAGAAGATGCAGCTAAACGCTGATAAATGCAAAGTCATGGTCATCGACTTTAAAAGTCAGACACACCATTTCACTCCTCTCCTGGGTAAGAGAGTGGGGTCTGGACACAGCAAAGGAGGTGTCTCGAAACTGGTTCCTTCTAAGACAGCATTTGAAGAAGCTGCAGGGAAAGATGTTCAAGAAAAGCCGAAACGGTTGGAAAAGGGGCAACTACAAGTAAAAGATGAAGAAATTGCTGGTTTACGAAATCAGGTTACAACCTTAGACAGACTGTTAACGGCCAAAAATCAGGAAGTGATTGAACTCGAAACTAGTCTCTCAACAGCTCAACAATTAGCGTTAAGTGAACGTCAACGTCAGGAGTCACCTGATTGGGTACTTTCACGAGATCAAGTTGAGGTGACAAAAAAATGCCTTGGTAGTGGAGGCTGGGGAAGTGTTATGGAAGGACGGTATTGTGGCTGTGCTGTAGCTGTGAAACAGATCCATGATTTGATCATTTCTCCTTACAGTCGTAGATTGTTTGAACGGGAATTGGTCATTGCATCAAGATGCCGCCACCCTTGCCTGCTGCAGTTTATTGGAGCTACAAATGACGAAGAGAATCCATTGTTTGTTACAGAGCTCTTGGAAACAAGTTTACGAGCATTTATAGAGCAGAGATCCCTCGCCAGGCAGTCTCTTTCCGCATCTGAACTATCCGTTATTTCTCTGGATGTTGCTCGGGCACTAAACTACCTTCACCTAAAGCAACCATCTCCCATAATACATCGCGACATAAGTAGTGCAAATGTATTGCTATGGAGACAAGGTGACCAATGGCGAGCTAAGGTGTCAGACTATGGTACGGCTAATTTTAAGCAACAGACCATGACAGTTGCTCCAGGGGCTGCAATTTACAGTGCACCTGAGGCACTCACTAAGAATCAAACAGTTAAGGTTGATGTCTACAGCTACGGTGTCCTTCTTTGTGAGATGTGCATCTTGGAGATGCCAGACCCTGGAAGACGAGAAGAACAAGTTGCACTTGTACCAAACCGCGCGATTCGAGCTCTCATCCGGGAATGTCTGAAAACAGAGCCTGACGCGAGACCAAGTATGGAAGAAATAACCGGTGAACTTGCACAGCCAGCATGA

Transcript

rna-Spis14284_mrna

ATGCAAACTGGTGAAAGTCGCATAATGAACCCCACCACCCACCAGACAGTTGTCTGGTTTTGCATAAACAACTTTGCTGTTGCCAAGCCCCACTCATCTAAACGTTACGAAAGTATACCTTTCGATAATTTACTTTTCAACATGGCCGGCGTGAATGACAACAGTAATCCAATCGAGTCTTCACCAGATGTAGAGACTCAGAGAAAGGAAATAGCAAAGGCTATGAAGAGGCCTTTCGTTAAGGGTGATATCTGGTATCTTGTGGATAGTTGCTGGTTTAAGCAGTGGAAGAAGGTTACTGGGTATGATTCACAGGATAAAGCTGATGAAGGAAAAGAATTCAATTATCCAGGTCCTATAGATAATACAAGTCTTTTTGAAGCTGATGGCTGCACTCTGAAAGAAAATCTCATTGATGAGCTTGATTACAACCTGCTCACAAAAGACTCGTGGTTGAAACTTGTATCATGGTATGGAATTAGTTCACACCAGCAGACTCTTGCCAGAAAGGTTGTGGAATATGGAAAGTATCTCAAATACCTTAAGGTTGAAGTCTACCTCAttgctttgaaacttttcaaatgCTCAGAACCCCAGATGTTTGTTACAAGGCTCTTCAGTAGGAGAGATACTGTGGGTCATGTTGTGTCAGAGATGAAAAAAGTCTTTAGCATACCAGAAGATGCTGAAACAGAAGTGTGGTGGAACAAGGGCTACCTTACATATGAGCTTCTCGATAATTTGAGATGCGCTGTGGAAAATGCTGGCCGTTATCATGGAGAGGTTCAAACTTGGAAGTACGTTGATGACACGACGGTGTCAGAGATCGTCCCGCGCAATGCATCAGGTGACGCCCAAAACGCTGTCAATGTCGTGGAGGATTGGTCCAAAGCACAGAAGATGCAGCTAAACGCTGATAAATGCAAAGTCATGGTCATCGACTTTAAAAGTCAGACACACCATTTCACTCCTCTCCTGGGTAAGAGAGTGGGGTCTGGACACAGCAAAGGAGGTGTCTCGAAACTGGTTCCTTCTAAGACAGCATTTGAAGAAGCTGCAGGGAAAGATGTTCAAGAAAAGCCGAAACGGTTGGAAAAGGGGCAACTACAAgtaaaagatgaagaaattgctGGTTTACGAAATCAGGTTACAACCTTAGACAGACTGTTAACGGCCAAAAATCAGGAAGTGATTGAACTCGAAACTAGTCTCTCAACAGCTCAACAATTAGCGTTAAGTGAACGTCAACGTCAGGAGTCACCTGATTGGGTACTTTCACGAGATCAAGTTGAGGTGACAAAAAAATGCCTTGGTAGTGGAGGCTGGGGAAGTGTTATGGAAGGACGGTATTGTGGCTGTGCTGTAGCTGTGAAACAGATCCATGATTTgatcatttctccttacagtcgTAGATTGTTTGAACGGGAATTGGTCATTGCATCAAGATGCCGCCACCCTTGCCTGCTGCAGTTTATTGGAGCTACAAATGACGAAGAGAATCCATTGTTTGTTACAGAGCTCTTGGAAACAAGTTTACGAGCATTTATAGAGCAGAGATCCCTCGCCAGGCAGTCTCTTTCCGCATCTGAACTATCCGTTATTTCTCTGGATGTTGCTCGGGCACTAAACTACCTTCACCTAAAGCAACCATCTCCCATAATACATCGCGACATAAGTAGTGCAAATGTATTGCTATGGAGACAAGGTGACCAATGGCGAGCTAAGGTGTCAGACTATGGTACGGCTAATTTTAAGCAACAGACCATGACAGTTGCTCCAGGGGCTGCAATTTACAGTGCACCTGAGGCACTCACTAAGAATCAAACAGTTAAGGTTGATGTCTACAGCTACGGTGTCCTTCTTTGTGAGATGTGCATCTTGGAGATGCCAGACCCTGGAAGACGAGAAGAACAAGTTGCACTTGTACCAAACCGCGCGATTCGAGCTCTCATCCGGGAATGTCTGAAAACAGAGCCTGACGCGAGACCAAGTATGGAAGAAATAACCGGTGAACTTGCACAGCCAGCATGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06337 all species →	DUSP	DUSP domain	Domain	Interproscan
PF14836 all species →	Ubiquitin_3	Ubiquitin-like domain	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR006615 all species →	Domain	Peptidase C19, ubiquitin-specific peptidase, DUSP domain	Interproscan
IPR028135 all species →	Domain	Ubiquitin-like domain, USP-type	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR051681 all species →	Family	Serine/Threonine Kinases and Pseudokinases	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR035927 all species →	Homologous_superfamily	DUSP-like superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44329 all species →	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX21231.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.