Gene detail

Detailed information of PFX22324.1 in Stylophora pistillata

Genomic Location: Spis.scaffold243:232434...246851
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

CCDC14

ATGAAAAGTAGTGGGGGAGTAAAGGCGTCCAAGGCATCCTTGTTGGCACGAGGTCTCCCCACAAAAACAAAGCCACCTGCGTTTAAAAGAGTCTCAAAAGGACAACATAAAGCTGTTAAGGAGACCAAACCAGGTTACAGTCTCTACACTTCAGACTCAGAAGACCAGGTTTCTTCAGTTGACCGAGGCCTGAACAGATGTGCAGCACTTCTGTCAAATATACTTGACAATGAAGACAAAGATGGTACAGCTAAGTCGAAGGTGACAAGTATGGGGAAACCTGTTAAGTCAACTTTAAAAAGAGCAGGAACAGCCTTACATCCTCAAGTTAAGCCAGACAGGCTTGGCAATCAAAGAGCAAGACCATCAAGTCGAAAAGTTTTGATTCCTACTGCCAAGACTGACGACAGAGCAAGTCCTTCCCCATCAAGGCCCCAAGAGGTAAAGCAAGGAATCTCAACAGCTTACAATGACCGCTTGGTGTCATCCACACCAATTCTCACTGCAGAGGAACGACAGAAACAGCAGCAGCTGCAAAGACGAGAGGCAGAATTGCAACAGGAACTGTCACAACTCAAGCAGCGTTATGAGTTGCTGCAGAAGCAGAACGATCCCAACCACCACACAGAACAAAAACTACAACTGCAAAACTCCATGATGCAAGAGCTCGACAGCCACCAGCGGAAAAATCCTTTACAAAGGTCTGCCTCTTCTAGGCACTCAACTGAACGACAGTCTGTGAGTAACTCTGGAAGTGAGAAACACTCGAGGAGACCATCAGCGCGGAAAAGTCTGGATTATTCAGGTTTTCCTGAGGTGAAAACTTCGGCTAGTGACACTTCTGTTGATCGTGGCTTTGACAAGCCCCATGTAGAGGGTGTATTAGATGCGACGGGAGGGGAGGGTCGTGAGCGTGTTGGAGACGATGATCTGCTGCAAGGTGTGGACGACTCAGTAACGCAAGAGGTTGACACGTCAGGATCAAAGAAACAAGTCAGAATCATATCACCTTCTGGAAACACTTCACCTCACGTTGACAGAGAATCGTTAGCAAGTGCAAATCCACTTCAGAATATGTCCAATTCTACAAACACAGGAATTTCGGAAGGGAAAGCAACAAGGCAAATAGCCACCCCATCATCTCCTTCTGCTCGGGCAAGCTCCAGGAGAGCGAAGGATGGAATAGAAATTTCTTCTGCTGAAAATCAGGCACGGATGATTGAGTACTTAATCGATGAACTTAGAGCGCTGCTTGGAAATACAGGTGATTTGGAGGTAGATCGTTTGCTTAGTGAAATAGACAATGCGGCGAAGCTTCTACCCTATCTCCTGGAGAAAGATCACACAGCTTCTGTTTCTCAGGAAACTGAACAGGCAGTACGAGCCTATAAAGTTGAAAATGCTCAGTTAAAAAGGAAGCTCCTTATTTCTCACCAGAAGTTAAAAGAAGGATCCATAAAGAAATACGACGACAAATCCTCTGGCAGGACGGATCTAGCTTTTGAATTGGCAGCTTGTAGGTCGGTGAATAGTGTACTCCAGAAACAACTTTCAGAAGAGAAAGACAGTAAAGAGCAAGTATTAACAGAGAGGGACCGACTCTCGCAGAACCTTAACGAACTGAAGGAGGAAAGAAAGAAGTTTCTACAAATTCTATCAAACAAGGAACAAGATAATCTGCGATTGAAGCGAGAATTGCAGCAAGATTCGTCCAAACTAACTGCTGAAAACGACAAGCTTAAAGCAGATCTTGAGGCTGTTTACCTTTCGACGGAAGCAGACAAGAAAGAAGCCACCATCCTTGGCCTTTCTTTGAAACAGAAAGATGCAGAAATAGACAGACTCAAAGAGCTCACCAGGGGTCTTCAACAATCTCTAACCCGCTTGCTGTCAGACATAGAACAGTTCCAGCCAAATGGCCCTTTAAAGCTGGGCAGCATGTTGGATAAGGCCAGCGCACTGGAAGGTTTAAATAAATTTTTAGGGAGTGGCCTCCAGACAGCAGGCCAAGTAACGACCCCAGGGCTCTCCCCTGAGGTTTTACATCTTGCAAGACGAAGTAACAGAAACCCTTTATCTCCAAGTCAGCCCGAAAAAACATTAATTACCACTGAGCAATCGCCGCCACTCAGTCAAGGTGTGGTGTCAATGGGGAAAGTTTCCGGGAGGAGTTCTGATTTAAAATACAAAAAACATTTACGATTTGCGGACGCTGCACAGGACACCTCTGTGCATACGGATGGAATTGAATCATGGGAAAACGGTTTAAAAGTGGAAGATTTGGAGGATGAAGAAAATGGCGGTGATTTATCTTCCCTTTCATCAGGAGAAGAAGAAGATTTCAAGAGAGATTTAGCAAACCTTGACGCTAATATTGCAAGGATACAGAAAAGTTTGCGAGAAACCGCCCATAGAACTTGA

Transcript

rna-Spis13161_mrna

CGGGAAAAGATGATCGCAGATGATCTTGCTGAGACAAACACAAAcatgttaaaacaaaactgtttgaaaaaagtTGGGCATGAAAAGTAGTGGGGGAGTAAAGGCGTCCAAGGCATCCTTGTTGGCACGAGGTCTCCCCACAAAAACAAAGCCACCTGCGTTTAAAAGAGTCTCAAAAGGACAACATAAAGCTGTTAAGGAGACCAAACCAGGTTACAGTCTCTACACTTCAGACTCAGAAGACCAGGTTTCTTCAGTTGACCGAGGCCTGAACAGATGTGCAGCACTTCTGTCAAATATACTTGACAATGAAGACAAAGATGGTACAGCTAAGTCGAAGGTGACAAGTATGGGGAAACCTGTTAAGTCAACTTTAAAAAGAGCAGGAACAGCCTTACATCCTCAAGTTAAGCCAGACAGGCTTGGCAATCAAAGAGCAAGACCATCAAGTCGAAAAGTTTTGATTCCTACTGCCAAGACTGACGACAGAGCAAGTCCTTCCCCATCAAGGCCCCAAGAGGTAAAGCAAGGAATCTCAACAGCTTACAATGACCGCTTGGTGTCATCCACACCAATTCTCACTGCAGAGGAACGACAGAAACAGCAGCAGCTGCAAAGACGAGAGGCAGAATTGCAACAGGAACTGTCACAACTCAAGCAGCGTTATGAGTTGCTGCAGAAGCAGAACGATCCCAACCACCACACAGAACAAAAACTACAACTGCAAAACTCCATGATGCAAGAGCTCGACAGCCACCAGCGGAAAAATCCTTTACAAAGGTCTGCCTCTTCTAGGCACTCAACTGAACGACAGTCTGTGAGTAACTCTGGAAGTGAGAAACACTCGAGGAGACCATCAGCGCGGAAAAGTCTGGATTATTCAGGTTTTCCTGAGGTGAAAACTTCGGCTAGTGACACTTCTGTTGATCGTGGCTTTGACAAGCCCCATGTAGAGGGTGTATTAGATGCGACGGGAGGGGAGGGTCGTGAGCGTGTTGGAGACGATGATCTGCTGCAAGGTGTGGACGACTCAGTAACGCAAGAGGTTGACACGTCAGGATCAAAGAAACAAGTCAGAATCATATCACCTTCTGGAAACACTTCACCTCACGTTGACAGAGAATCGTTAGCAAGTGCAAATCCACTTCAGAATATGTCCAATTCTACAAACACAGGAATTTCGGAAGGGAAAGCAACAAGGCAAATAGCCACCCCATCATCTCCTTCTGCTCGGGCAAGCTCCAGGAGAGCGAAGGATGGAATAGAAATTTCTTCTGCTGAAAATCAGGCACGGATGATTGAGTACTTAATCGATGAACTTAGAGCGCTGCTTGGAAATACAGGTGATTTGGAGGTAGATCGTTTGCTTAGTGAAATAGACAATGCGGCGAAGCTTCTACCCTATCTCCTGGAGAAAGATCACACAGCTTCTGTTTCTCAGGAAACTGAACAGGCAGTACGAGCCTATAAAGTTGAAAATGCTCAGTTAAAAAGGAAGCTCCTTATTTCTCACCAGAAGTTAAAAGAAGGATCCATAAAGAAATACGACGACAAATCCTCTGGCAGGACGGATCTAGCTTTTGAATTGGCAGCTTGTAGGTCGGTGAATAGTGTACTCCAGAAACAACTTTCAGAAGAGAAAGACAGTAAAGAGCAAGTATTAACAGAGAGGGACCGACTCTCGCAGAACCTTAACGAACTGAAGGAGGAAAGAAAGAAGTTTCTACAAATTCTATCAAACAAGGAACAAGATAATCTGCGATTGAAGCGAGAATTGCAGCAAGATTCGTCCAAACTAACTGCTGAAAACGACAAGCTTAAAGCAGATCTTGAGGCTGTTTACCTTTCGACGGAAGCAGACAAGAAAGAAGCCACCATCCTTGGCCTTTCTTTGAAACAGAAAGATGCAGAAATAGACAGACTCAAAGAGCTCACCAGGGGTCTTCAACAATCTCTAACCCGCTTGCTGTCAGACATAGAACAGTTCCAGCCAAATGGCCCTTTAAAGCTGGGCAGCATGTTGGATAAGGCCAGCGCACTGGAaggtttaaataaatttttaggGAGTGGCCTCCAGACAGCAGGCCAAGTAACGACCCCAGGGCTCTCCCCTGAGGTTTTACATCTTGCAAGACGAAGTAACAGAAACCCTTTATCTCCAAGTCAGCCCGAAAAAACATTAATTACCACTGAGCAATCGCCGCCACTCAGTCAAGGTGTGGTGTCAATGGGGAAAGTTTCCGGGAGGAGTTctgatttaaaatacaaaaaacatttACGATTTGCGGACGCTGCACAGGACACCTCTGTGCATACGGATGGAATTGAATCATGGGAAAACGGTTTAAAAGTGGAAGATTTGGAGGATGAAGAAAATGGCGGTGATTTATCTTCCCTTTCATCAGGAGAAGAAGAAGATTTCAAGAGAGATTTAGCAAACCTTGACGCTAATATTGCAAGGATACAGAAAAGTTTGCGAGAAACCGCCCATAGAACTTGACATTATTGCAGTTGGGAAATATATGAACTAGTTAAGAAAAACTTATCGAAGTTTTTAGACAAGTCGCCTATTTTCGTACACATTCTCATAATGtaaaggaatataaaaaatataataaattactttttc

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15254 all species →	CCDC14	Coiled-coil domain-containing protein 14	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029343 all species →	Family	Coiled-coil domain-containing protein 14	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22367 all species →	COILED-COIL DOMAIN-CONTAINING PROTEIN 14	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0034451 all species →	Cellular Component	centriolar satellite	Interproscan
GO:0071539 all species →	Biological Process	protein localization to centrosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16541	CCDC14; coiled-coil domain-containing protein 14	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.