Gene detail

Detailed information of PFX22599.1 in Stylophora pistillata

Genomic Location: Spis.scaffold234:185952...217697
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

AWC38_SpisGene12859

ATGGAAGGTAGGGGCATGAAAATGAGTGGTTATCCAAAAGATTCCTCTGCTGCATCCGAGAAACGTCGATCATGGAGCTGGCGAAGACGAGAAGGGCTGGGGGAGAGTGAGGGTGAAATTGACATGGATACCTTGGAGATTCTTTGTGAAGTTCAAGAAAAAACAAATGATGGATCAAGTGGACTTAGCTCACAAGAGGCGCTGAAAAGACTTTTTGATGCCATTGGTGATGAGTTAGCAACTTTTAATGCAGCAAACCAGTGTACATGGAGAAGTGATATTTGGAGTACACTGAGGGACAACCATCACTTGCCTATAAGCTTTATTAGTCTGACATTTCTTGTGTTTGAGTTTCTTGTGATGGTGATGTCATATGTCTTCAATGATAAAACAAGGAGCCTTCCACTGATAGAAGGAATCATTGTTCTGTTACTGACAGCTATCAATTTGACTTTGTGTGTACGAGAGGAAAGACTGAGAAGGACGGAGATGATCAGAAGTACTCAGGAGCTACTTAACAGCTGTGACTCTTGCTGCAGCTGGATGCCATCTGATTATATTGATCCCTGTACCCCTCCCTCACTGTCCATTTCATTGGTGCACGCCTACAGAGACAATGCAATGGTCAGTGTCCCCAGTAACCTGCTTGTTCAAGGTGATGTGGTGGTACTAGGACCAGGTCATACTGCCCCTGCACGAGTGCAGCAGCTCTCCACAGAATTTCCAAACAGAGGGCCATCCTTTATTCTTGAAGAAGGTCAGGTGTACCATCCTGTTACACAGAGTAGCTCTACTGATGGTAACAAAGGAACTGGTGTACAGCCATCCCAGCCTCATCCACGAGAAAAATTTCTTGTTACAGAAAGTCCTTTCAAACAAAATCTCAGAACAATTTTAAATAATTCTTTGAAGAGGCCAATTAGCATAATTGGAAATGAAATGCATTACATCACAAGTACTATCATAGATAAGAAACTTCTGTTTGTAATTTTGGTGTTATCTTTGACTGTAAACATTTTAAGGACAATTTTTCTTAAAAGTGAATCAGGGCATTGGAGTGAAATGATTCTTTTATTACAGGGTTATGCCATCCTGCCACTCTTACCAATTTCTTTTCCAATTGTATGGATATGTTTAAATCTTTATGGAACAGCACGAATTAAAGTATTATTTACACAGTTAAAAGAGAAAGAAGATCCAGCAAATGAAATAACTCTGAAAGAAGTATTGCATTGCTTTTGCAAGAATTTTTTGGGTGATCCATCCAGTTTGCCAAGGACTGCTAGCCTTTTAGAAATCCTTGGAAGTGTCACAGTGTGGTGTTGTGTTGACAAGGAAGGTATTCTGTCCTTACCAAATCCCTGTGCTGAAAAAGTGTTCTTCTTGAAGAGTAGAAAGCACAAGACAAAAGAAGATTTAGCTGGTCAGGGAAAGGAGAGAAAGGAAAGTGTCTGTACCTGGGAAAGTGAAATAAGCAGAATTTCATCAAGCCAGGATGGCCAAGAATCCTCGGATGAAGAGGATGATGATGATGTTTCTGCATCTCTTGAGGATTCTGAATCTGTGGAAAAAAATTGGAACACTTGTTTTAAAGGACATAGGGAGGTTCTCAACTTGTCTTCTGATCCAGAGAGTCAATTTGGACTGAGATTTGATGACATTAGATGGCAAAATCACATCAACTCTCTCAAACCCTTGGGTCTAAACATTCTTCTTAATTCATGCTGTAAATCTCCAGTGAGATGTTTACGGTTTGCTGACCACACTGGCCTCTTGTCCCTTTCCTATAACTCAGTTCCTTTGCCTTTCTTTAGAAGATGTCTGTGCCTACTTGGTAAGGAAATAGGCTTTATGGAACGTGCACTTCAGCTCTTCAGCAAACAAAAATACATTTTTGCTGTACAGTCACCCATTAATTCCAGTTTAAGAGTACCCATTCATTCCCATTCGTTCTTATCCATTTCAAAAGAGAAGCCTATTCCTACTATGGTCTGCCTTATCACTAAAGAGGAAAACTCTGGTTCTCTGCAGCTTCTTACCCAGGGATCAGCTGATGTTGTTCTAGATGCTTGCACTGATTACTGGGATGGATCAAGTCTTTGTCCTGTCACAGCATTTGAGAGAAAGAAAGTACTTGACTTTTATCAGAGGAACAGCATGTCAGCATATTGTGTCGCATTTTCTTATCGTCCTGTGACCGAGCAAATACCAGATGAAAAGAGTGAAGATGTATATTTAGAGCTACCCTCTACTGCTCAGTGGATTTGTAGTGAAAGCGATGAAATGGAAAGTGCCTCTGAAATTTCAGAGGCAGAATCTGAAAACTCAGACAAGGATAGTGCTTTTAACTGCTTTGAGCTTCTTGAAGCTGATATGGAAGCAGCATCTTTGTTAGAAAGAGTGAACATTGCTGAAAATGTGGAGAGCTATCAAAGAATACTTGGAGGACAGATTTTCATTGGAGTGGTGACGTTACAGTTTCAAGCCAAGAAGGATATTCTTCCTCTCATTGAAGACCTGAACAATGCTGGAATCCGATTTGTTTATTTTTCAGCTGAAAATGAATTAAGAAGCAGGGTATTTGCAGAGAGGATGGGCCTAGAAACTGGATGGAACTGTCACATCTCTCTCAGAGAGGGTGGCCATCTCTTGGAAGACCGTGGAAGCAGTGCAACAGTGTCGGACAGGAATACTGAGAGTCTTTATGACATCCAGGATGATGCAAATGTTTCTGGGCAGGATGGTGATGAGAAACATGTTAGCTGGAGAGTGACCCACACTGAATCTACTGAAAAAATCTCACATAAAGCTGAAGCAGTTGAAATGGATCCCCTATTAGAAAGTCAAAGTGATGGTGGTACTCTACTGGGCAGTAGTCAGATATCAGCACCTGAGGATTATTGGTTCTTTGCTAACAGGGCTAAACTTCCCAGAGGGATCCAAAACATCAGGCCTCATCTGGAGAGTGTTGATAACGTTCCTCTTCTTGTTCCCCTCTTCACTGATTGTACTCCATCAGCTGTTCAGGAGATGATTGCTATAATGCAAGATTTTGGAGAAGTAGTCTGTTGTGTAGGAAGTTCATTTAATTCTGCTAATCCTGCCATATTTATTCAGGCAGACATAGGTATTGCAGTGGAACCTCTCTTTCCACAACTGTGTTTAAAAGGTTTGCCAAAAGACTTCAGATCAGGAACACCACAGCTTGGACATGAAAATATCAGAGAAAAACTTCGTCAAAGATTCAGTGAGGAACAATCCATTGAAGATGAAAACGAGCTGTCCCCACTTGAACTGAGTGCTTTCCTCAATGCCCTTCCATGTTCCTTGGCATTCCACAGAGATACAAATTTTAAGTTTTTGAGTTTGATAAAAGAGGCACGTCGTATTTGCTTTGGACTCAAAAACTGTTTCTCCTTCATGCTATCGTGTCAGTTAGTTCTTTCTGCCACGATGCTTCTGTCAGCATGTTTCGTCCTCCCACCTCCCCTAACAGGGCTTCATCTTCTGTGGTTGTCATGCCTTATAGTACCTCTGCTGAGTCTATCATTAATTGGCTCTCCAGCTGATCCAAATCTTATGACAATGATGACAGGCAAAAATGACAAAAACTTCAAGGACATCACCTATACAGTTTGTTTTTTCTTCAGTGTTTGTTTCTTTCCCTCGCTTTGTATCTGCTGCCTTCTGCTGTTCCCCTTAAATCTCCATGGATTTTGCATCTCTGTGAACAAGAAATCTACTAACTGTCACTACCTGCTTGGATTTAGGAACACCACAGAACTATGGAATGGTCTAAGGGAGAGTCATATTCAAGCATTAGCCATGGCACAGGACATCAATGCATTTTTTCTAGTTCTAATTTTTGTGTTCCTGTCTTCAAGTTATGTACATCGTCTTCATTTGCTCTGGAGGAAATCACCATTTGTAAACAGGTCATGGATCATTTCAGCCGTGATTATTTTAATACTTCAGGTAATTTACTTCACTTTGTCCCAAGTTGGGTGGAGTCAAGATGCCCCTTTAGTGTTTCATCTGACCGATGTTCCAGTGCCATCAATGATCATCATCTTTCTTTGGCCCATTGTAGCTCTAGGAATTTGTGAACTATTCAAGAGGCGATACATAAAGGAAAGGATCCGGTTTCAAAAGAGAGCCAAGTTAAAGTTTGGTACAAAATTAGGAATGAATTCACCATTCTGA

Transcript

rna-Spis12859_mrna

GTCTTACATGGGTGGAAGGAAATGTTTTATTCGTTGAAAATGTGATGTTTGTTTTGTGAGTTACCGATTTTTTTCCCAAGATCATCAGTATTATCAAAAGTCTTACCAAGGctcaaagtaaattttttaagacGTGCACTCTCTTGAAATGGCTGGACAGTTCGCATGATTGTTGAGAGATTGTTGTGGATCGACCCTTAAAGTTTGGAGGATCATGGAAGGTAGGGGCATGAAAATGAGTGGTTATCCAAAAGATTCCTCTGCTGCATCCGAGAAACGTCGATCATGGAGCTGGCGAAGACGAGAAGGGCTGGGGGAGAGTGAGGGTGAAATTGACATGGATACCTTGGAGATTCTTTGTGAAGTTCAAGAAaaaacaaaTGATGGATCAAGTGGACTTAGCTCACAAGAGGCGCTGAAAAGACTTTTTGATGCCATTGGTGATGAGTTAGCAACTTTTAATGCAGCAAACCAGTGTACATGGAGAAGTGATATTTGGAGTACACTGAGGGACAACCATCACTTGCCTATAAGCTTTATTAGTCTGACATTTCTTGTGTTTGAGTTTCTTGTGATGGTGATGTCATATGTCTTCAATGATAAAACAAGGAGCCTTCCACTGATAGAAGGAATCATTGTTCTGTTACTGACAGCTATCAATTTGACTTTGTGTGTACGAGAGGAAAGACTGAGAAGGACGGAGATGATCAGAAGTACTCAGGAGCTACTTAACAGCTGTGACTCTTGCTGCAGCTGGATGCCATCTGATTATATTGATCCCTGTACCCCTCCCTCACTGTCCATTTCATTGGTGCACGCCTACAGAGACAATGCAATGGTCAGTGTCCCCAGTAACCTGCTTGTTCAAGGTGATGTGGTGGTACTAGGACCAGGTCATACTGCCCCTGCACGAGTGCAGCAGCTCTCCACAGAATTTCCAAACAGAGGGCCATCCTTTATTCTTGAAGAAGGTCAGGTGTACCATCCTGTTACACAGAGTAGCTCTACTGATGGTAACAAAGGAACTGGTGTACAGCCATCCCAGCCTCATCCACGAGAAAAATTTCTTGTTACAGAAAGTCCTTTCAAACAAAATCTCAGaacaattttaaataattctttGAAGAGGCCAATTAGCATAATTGGAAATGAAATGCATTACATCACAAGTACTATCATAGATAAGAAACTTCTGTTTGTAATTttgGTGTTATCTTTGACTGTAAACATTTTAAGgacaatttttcttaaaagtgaATCAGGGCATTGGAGTGAAATGATTCTTTTATTACAGggttatGCCATCCTGCCACTCTTACCAATTTCTTTTCCAATTGTATGGATATGTTTAAATCTTTATGGAACAGCACGAATTAAAGTATTATTTACACagttaaaagagaaagaagatCCAGCAAATGAAATAACTCTGAAAGAAGTATTGCATTGcttttgcaagaattttttgGGTGATCCATCCAGTTTGCCAAGGACTGCTAGCCTTTTAGAAATCCTTGGAAGTGTCACAGTGTGGTGTTGTGTTGACAAGGAAGGTATTCTGTCCTTACCAAATCCCTGTGCTGAAAAAGTGTTCTTCTTGAAGAGTAGAAAGCACAAGACAAAAGAAGATTTAGCTGGTCAGGGAAAGGAGAGAAAGGAAAGTGTCTGTACCTGGGAAAGTGAAATAAGCAGAATTTCATCAAGCCAGGATGGCCAAGAATCCTCGGATgaagaggatgatgatgatgtttcTGCATCTCTTGAGGATTCTGAATCTGTGGaaaaaaattggaacacTTGTTTTAAAGGACATAGGGAGGTTCTCAACTTGTCTTCTGATCCAGAGaGTCAATTTGGACTGAGATTTGATGACATTAGATGGCAAAATCACATCAACTCTCTCAAACCCTTGGGTCTAAACATTCTTCTTAATTCATGCTGTAAATCTCCAGTGAGATGTTTACGGTTTGCTGACCACACTGGCCTCTTGTCCCTTTCCTATAACTCAGTTCCTTTGCCTTTCTTTAGAAGATGTCTGTGCCTACTTGGTAAGGAAATAGGCTTTATGGAACGTGCACTTCAGCTCTTcagcaaacaaaaatacatttttgctGTACAGTCACCCATtAATTCCAGTTTAAGAGTACCCATTCATTCCCATTCGTTCTTATCCATTTCAAAAGAGAAGCCTATTCCTACTATGGTCTGCCTTATCACTAAAGAGGAAAACTCTGGTTCTCTGCAGCTTCTTACCCAGGGATCAGCTGATGTTGTTCTAGATGCTTGCACTGATTACTGGGATGGATCAAGTCTTTGTCCTGTCACAGCATTTGAGAGAAAGAAAGTACTTGACTTTTATCAGAGGAACAGCATGTCAGCATATTGTGTCGCATTTTCTTATCGTCCTGTGACCGAGCAAATACCAGATGAAAAGAGTGAAGATGTATATTTAGAGCTACCCTCTACTGCTCAGTGGATTTGTAGTGAAAGCgatgaaatggaaagTGCCTCTGAAATTTCAGAGGCAGAATCTGAAAACTCAGACAAGGATAGTGCTTTTAACTGCTTTGAGCTTCTTGAAGCTGATATGGAAGCAGCATCTTTGTTAGAAAGAGTGAACATTGCTGAAAATGTGGAGAGCTATCAAAGAATACTTGGAGGACAGATTTTCATTGGAGTGGTGACGTTACAGTTTCAAGCCAAGAAGGATATTCTTCCTCTCATTGAAGACCTGAACAATGCTGGAATccgatttgtttatttttcagctgaaaatgaattaagaagcAGGGTATTTGCAGAGAGGATGGGCCTAGAAACTGGATGGAACTGTCACATCTCTCTCAGAGAGGGTGGCCATCTCTTGGAAGACCGTGGAAGCAGTGCAACAGTGTCGGACAGGAATACTGAGAGTCTTTATGACATCCAGGATGATGCAAATGTTTCTGGGCAGGATGGTGATGAGAAACATGTTAGCTGGAGAGTGACCCACACTGAATCTACTGAAAAAATCTCACATAAAGCTGAAGCAGTTGAAATGGATCCCCTATTAGAAAGTCAAAGTGATGGTGGTACTCTACTGGGCAGTAGTCAGATATCAGCACCTGAGGATTATTGGTTCTTTGCTAACAGGGCTAAACTTCCCAGAGGGATCCAAAACATCAGGCCTCATCTGGAGAGTGTTGATAACGTTCCTCTTCTTGTTCCCCTCTTCACTGATTGTACTCCATCAGCTGTTCAGGAGATGATTGCTATAATGCAAGATTTTGGAGAAGTAGTCTGTTGTGTAGGAAGTTCATTTAATTCTGCTAATCCTGCCATATTTATTCAGGCAGACATAGGtattgcAGTGGAACCTCTCTTTCCACAACTGTGTTTAAAAGGTTTGCCAAAAGACTTCAGATCAGGAACACCACAGCTTGGACATGAAAATATCAGAGAAAAACTTCGTCAAAGATTCAGTGAGGAACAATCCATTGAAGATGAAAACGAGCTGTCCCCACTTGAACTGAGTGCTTTCCTCAATGCCCTTCCATGTTCCTTGGCATTCCACAGAGAtacaaattttaagtttttgagtTTGATAAAAGAGGCACGTCGTATTTGCTTTGGACTCAAAAACTGTTTCTCCTTCATGCTATCGTGTCAGTTAGTTCTTTCTGCCACGATGCTTCTGTCAGCATGTTTCGTCCTCCCACCTCCCCTAACAGGGCTTCATCTTCTGTGGTTGTCATGCCTTATAGTACCTCTGCTGAGTCTATCATTAATTGGCTCTCCAGCTGATCCAAATCTTATGACAATGATGACAggcaaaaatgacaaaaacttcaAGgacATCACCTAtacagtttgttttttcttcagtgtttgtttctttccctCGCTTTGTATCTGCTGCCTTCTGCTGTTCCCCTTAAATCTCCATGGATTTTGCATCTCTGTGAACAAGAAATCTACTAACTGTCACTACCTGCTTGGATTTAGGAACACCACAGAACTATGGAATGGTCTAAGGGAGAGTCATATTCAAGCATTAGCCATGGCACAGGACATCAATGCATTTTTTCTAGTTCTAATTTTTGTGTTCCTGTCTTCAAGTTATGTACATCGTCTTCATTTGCTCTGGAGGAAATCACCATTTGTAAACAGGTCATGGATCATTTCAGCCGTGATTATTTTAATACTTCAGGTAATTTACTTCACTTTGTCCCAAGTTGGGTGGAGTCAAGATGCCCCTTTAGTGTTTCATCTGACCGATGTTCCAGTGCCATCAATGATCATCATCTTTCTTTGGCCCATTGTAGCTCTAGGAATTTGTGAACTATTCAAGAGGCGATACATAAAGGAAAGGATCCGGTTTCAAAAGAGAGCCAAGTTAAAGTTTGGTACAAAATTAGGAATGAATTCACCATTCTGATTAACCATTTttgtaaattacaattttctaaCTCAAACTTGAAGGGGATTCAGAAATATATAAGAAGGGTACAGAAATATTTGGGTGAGAGTTCACACTCACTTGTTACGTAAAACACATGACCTTATCCCTGAAAAGATGGTTGCAGGTTGCACTGAATAAACAAGTTAAAACTAAAAATCCAAGGAAAAAAATGGGCAAACTTTATCACCTCACCAGCAAATCGAAGAAGATGATAAGTAACTTCTTTAAAGGCAgcataaaaactcaaaattcaCCTCATAATGGGATGTTgtgaatttattattttcaactaaaaagtgaattttcttttatttcggAAGATCATTTACTTCCACCATGATGTTGTTTAAAACAATACTTTCATGTGTGTGCTATCCTCACCAAACTATGAAACAGTTACAGAAAGATTGTGTATTTTGTACAGTTTATACCTTGttctatttctttatttttaactctATTTTTAGGTAGCAATGTTGTGCAAAGTTAAAAGAAAGTGAGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00689 all species →	Cation_ATPase_C	Cation transporting ATPase, C-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039720 all species →	Family	Transmembrane protein 94	Interproscan
IPR023299 all species →	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR006068 all species →	Domain	Cation-transporting P-type ATPase, C-terminal	Interproscan
IPR023298 all species →	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13219 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25291	TMEM94; transmembrane protein 94	-	Signaling proteins	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.