Detailed information of PFX22948.1 in Stylophora pistillata

Genomic Location: Spis.scaffold224:308182...346895
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09728
all species →
TaxilinMyosin-like coiled-coil proteinCoiled-coilInterproscan
PF00439
all species →
BromodomainBromodomainDomainInterproscan
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR001487
all species →
DomainBromodomainInterproscan
IPR036427
all species →
Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR026183
all species →
FamilyTaxilin familyInterproscan
IPR019775
all species →
Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR018359
all species →
Conserved_siteBromodomain, conserved siteInterproscan
IPR052060
all species →
FamilyBromodomain and WD repeat-containingInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16266
all species →
WD REPEAT DOMAIN 9Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0019905
all species →
Molecular Functionsyntaxin bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007010
all species →
Biological Processcytoskeleton organizationInterproscan
GO:0008360
all species →
Biological Processregulation of cell shapeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PFX22948.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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