Gene detail

Detailed information of PFX23039.1 in Stylophora pistillata

Genomic Location: Spis.scaffold220:227521...237161
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis12420_mrna

GAAGAAGCTGTTTAGTGGGAAGTATAGTAACTTGGGCGGGCAATCGCGAACTTTTTACTGTTCTGAAGATGGGGGAAGAATGTGATCAGTTACGAAAACACTTGAAAGAGAATGGTCAGGAGCATCTGATGAAATTTTATGACACGCTATCGCAGGATCAACAGTTGGCGTTTCTCCGCGACCTTCAAAGCATCGACTACCCGAAGATGAAACTCGCGTTCGAGAAGACGACGGCTGAGGCGACAACTCTACAAAAGAAGGACGAAAATTTGCGGCCAGTTCCTCCAGAGCAGGTTGGCAGTGTCATCGGAgcagaaaaccaaaacagtgtCGCCATCTGGAGAAATCAAGGACTGCAAGCAATAAGCGAAGGTAAAGTCGCTGTACTACTTCTTGCTGGTGGTCAAGGTACTCGGTTGGGAGTTAATTTTCCGAAGGGAAGGTACGATGTCGGTTTACCATCAGGGAAAACCCTCTATCAGCTGCAAGCTGAGAGGATCTTGAAACTGCAGGAGCTGGCTTACGAACACACTGGAGGTGGAGCTACGATTCCATGGTACATCATGACCAGTGAACATACAATGGTTGACACAGCAGAGTACTTCCAGAATCACAAATATTTTGGACTCCAAGAAGATGACGTGATTCTCTTTGAGCAGCATACCCTTCCATGTTTCACCTTTGAAGGTAAAATCATTCTTGACCAACCTGGTAAAGTTTCCAGAGCTCCTGGAGGAAATGGGGGCTTGTATGAAGCTCTTCATGAGAATTGTCACATTGACAAGATGCGAGAACGTGGAATAGAGTATGTCCATGTCTATTGCGTTGATAATATCCTGGTCAAGATGGCGGATCCTGTTTTCATTGGATTTTGTATTGACAAGTCAGCAGAATGTGGTGCTAAGGTTGTAGAGAAGAAAAGGCCCGAGGAGAGGGTAGGGGTAGTTGTCAAATGCAATGGGAAATATCAGgTTGCAGAGTACAGTGAAATCTCTGAAGAGCTGCAGAAGAAAAGGGACCCTGATGGAAAACTTACTTTTCGTGAAGGAAACATTTGCAACCACTTCTTTACCATTgactttttggaaaaaattgtcaaAGAGCTTGAGCCATCCCTAAAATATCACATTGCTGAGAAGAAGATTCCATATGTTAATGACAGTAGGAAACGgattGAGCCTGATAAACCCAGTGGAATAAAACTGGAGAAGTTTGTCTTTGATGTTTTTGAATTTGCAGAAAAATTTGCTGTCTTAGAAGTTGCCAGAGAAGACGAATTCTCTCCTCTCAAAAATAAGAAAGGTTCACAAACAGACAGCCCAGAAACAGCTTTAAGGGACTTGCTAAATTTGCATCATAAGTACATAATCAAAGCTGGGGGAACATTTGCTGACAGCACAAAagaCGGTTCTTCACTTTGTGAAATATCTCCCCTTCTCTCTTATGCCGGAGAGGGATTGGAAGAAGTAGTGAAAGGCAAGCAGTTCTCAGCAACAAAGACTATTCATCTGAAAGCTGAGAGTGAGGAAGGAAAAAATGGAGAGCTACCATGCAAGAACGTCAAGGAGGGTTAAAAATATATGCTGGTCATAGGAATCTTTCAATtgctgaaaaattttattttcatttcattatagttacaggggtttcattaagggcctgggcaccagacaaattgaccagttgtgagaaggtttttgcccacctggtttgaccatctgtaggaaagtttatcttataacgaagttcagttcaaaaagttttgcccgccttTGAGTTTTGCCCTCCTGCTGAGAacgttaatgaaacccctgcagtTATTAGAAGTGATCGACTGGTTAGGAAATTCGACAGATTTACTTTTTGTACACTGCAGGTTCTTGTTTGGGcctccaggttttttttttgttccataGCAATTCACTCATCTTGAACTAACTGACGTAAAGAGGCTGTCAGTAAATTTACTGAGGCACAATGTGTGAACACCTATAAACAAGAGACTGTTAACTCCAATACAGCTTTCAACGTTAACTAAAGCAATGTTATTGTCATCTTTAATTTTTGCCGGCTTTCCTAACCAGTTAACTCATATAACTATGGTTCTATTTAGTTAGGAAAATAATGGTATGTTATAAATATAATGCTGATATAAAAATGTACTGTAGCTTCAATTCTGAAGGAAATGTTATTGTAATTCAAATCTTTATTGTTATCATATGACCTGTCCAGTCCCATGCATGCAATCTCCTAGGAAACCATTATGATAGTGAGCCAGTCCAGAAAGAGCTGTTCGGCCTCACGTGCCTTTGTAGCAAAAagctagaggaaaaaaaaagagtttaaaaaatgtcatGTCACTAGATCAAGTGTGTGTATTTATGGTTCTGACCAGAGAAGACaatggaaaagtttttattgttgAATGCTTTTTGTGGTTGTTCTGCAAGCGCCCATCTATTGCATACTAGCTAggttgaaatgaaattttttatatttagtggtcatatgataaaatgcttattgactgaattTGGTTGGGCCAGACTGAAAAATACTTGGTTCTCATTCATGGGGTATGGACTAAGCACACCTTGAGCCAAATATTCTCCCATGTGGCCCTCCCACCCAGTCGATAAATAcatattattattgtcattgttattatcaacattatcactatcattatcatttattgtctgttattttcatcatcattatcattattggtCATTTCcatgtcatcatcattattaatgtCATTGTCATTGGCATTACcatcatctttattattattataattgttattgctatcattattattatcatcatatgttatataaatgttatcattattgttgtttCTAAGTCAGAAAATATGAAACATTTTGGGAAGGGTTAGGAAGGAGGGCTTTTAGGTGGGTGTATCAGAATATTTCACCATGCTGGAAGTTGAGTGGAAATGCACGCACACTCATGCAGCACTtggtcaaccaatcagattcgaAATAAAAGCCTCGATTTTAACTTACGTTTGGCgtttaaaaaaagatgtttcttgcttatttttttttcctctgatttGATTGTGGGAAACATTCGGGAATGGGATTTAAAAAGACGAagattttatattctttttttcttcaagttaaAGGAAATATTCGCACATGCCAAATTTCTCCGCAAACATGAACATCAAAACAGAACTAACTCTGATCAAAAATGTGCCTTTACGTACTTGACTTTTAGATGGATGAAAATCTAACTTTGGCACCAGTTTTTTACAAGGCCTGTGCTtcatgtataactttttgcataTCAGATGGAAGTGATCCAAAATTAGTAGTTCTGAATATGTACTTTAGTGTCTGAATGACAAGTGTCATTGATAGAGCAGTTTTCACTTAAATGTCGAAAGCAAACCGGGGTTGCACTGATTTTGCTTTAAttcgctctttgattggtctagaaaactcgcgccattctctcaaccaatcaaatgcaaaactaaaacccaCCATGACTTGATCGCTGGCGTTTTGCCGCGCTTTAGGCACTTTGGTTGGATTTGCCTAGAGTTTTTCATCGGCTCTTtgggatattttcctttcttctgattgttTTACgacattcatttgaaaaaagctCTATTGCAATGGTATCAGAACTAAAGTGGATCACATCAAGAACATTAATTTGCATGCTAAACCCTCTAGATAGAAGAAATAATTATAACTTTGGCACTTAATTGTTTCTGTATTCTTTGAAAACTATGAGGTGGTGATCCGTAAATGCTGATCGAAATAGGCATTTAAGTTTCAGATCGACTTTTAATAGGATTTAAAATTAATATCGTAACATCTGGATGTGAAGGAGGTTAACAAGACTCTTTCTACTTTCCGTTTAATACAAGGTGCTGTACTGATCCTGAACACTGGCGCCACTCTCCGCCAGCTCGACTCATCGGAACCAAATTATTACAACCAATCAGTAATCTATCACCCGACTTTTCTCGCACGGTAGACAGTTAACTCGATTTTACTTTCGTTTGAATAAAatggg

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01704 all species →	UDPGP	UTP--glucose-1-phosphate uridylyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002618 all species →	Family	UDPGP family	Interproscan
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR039741 all species →	Family	UDP-sugar pyrophosphorylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11952 all species →	UDP- GLUCOSE PYROPHOSPHORYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0070569 all species →	Molecular Function	uridylyltransferase activity	Interproscan
GO:0003977 all species →	Molecular Function	UDP-N-acetylglucosamine diphosphorylase activity	Interproscan
GO:0006048 all species →	Biological Process	UDP-N-acetylglucosamine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00972	UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase	EC:2.7.7.23 EC:2.7.7.83	Amino sugar and nucleotide sugar metabolism	ko00520	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.