Gene detail

Detailed information of PFX23285.1 in Stylophora pistillata

Genomic Location: Spis.scaffold212:284730...292809
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01084 all species →	Ribosomal_S18	Ribosomal protein S18	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR001648 all species →	Family	Small ribosomal subunit protein bS18	Interproscan
IPR036875 all species →	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR040054 all species →	Family	Small ribosomal subunit protein mS40	Interproscan
IPR036870 all species →	Homologous_superfamily	Small ribosomal subunit protein bS18 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13329 all species →	MITOCHONDRIAL RIBOSOMAL PROTEIN S18B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0032543 all species →	Biological Process	mitochondrial translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX23285.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.