Gene detail

Detailed information of PFX23326.1 in Stylophora pistillata

Genomic Location: Spis.scaffold211:403882...407102
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis12144_mrna

AGTGAACTCAGCAACAGGTTAACTTATCTATTGTGAATCTATGTTTCGTTACGGGCTTCTAGTTCTTTCGCCTTCGTGCCTCAGGAGCAAATTACCTGCTCTCTTGAGCCAAGTTTCTCAAGAAGTCAAAGAAGTTCTTTACGTAGATATCTACGAACCTGATTTTGTTGTTCATCGTGTGCGCAGTTTGTACGAGCTGTTGGTTGATGTTTATGGAACCGGCTCTTCCAAAACCGGGGAACTAGATGTCCGTGTTTTACTACCTCGGACTTTGGCCCCTAGTGGCAGTGGCACTAAAGAAGTTAGAAATCTCGTCAAATCGCCCGAAGTTGCTTTCGTTGATGATGTGTTCGAAAACAATGAATCGAAAGTTGGTCTTTTGGAGTTCAAGAAATGGCTGGCGAGACGTTTTCAGCTCTCTGATCTCGACGGAAAGCTGAAGTATTTGAACCTTGAAGATGAGATTATTAGCAAGGGAGGTGTAGAAAAAGAGCTCAGTAGCGATCTGAATGGTTCTTGTCTACAGAGTTACAAACAAGTGGTTCTCGGTGGAACGTTTGATCATATGCATTCTGGACACAGGTTGCTTCTGGCTGTTTCTTCTCTGCTTTGCGAACAGAGGATCACCGTTGGTCTTAGCGAGGGACCTCTTCTACAAAAGAAGGTCTTAAAAGAACTTATCGAGCCTTTCCAGGACAGAAAGAGGAACTTAAAAGAGTTTCTGGAGGATGTAAAGCCAGGTCTGGAACACAACATTATACCATTAACTGACCCAGTTGGTCCAGCGGGAACTGACCCAGAATATCAGTGTCTCATCGTTAGTAAGGAAACAGAGAAAGGAGGGTTTGTGGTGAATGACATGCGTGAgaaaaatggtttgaaccctCTAGATGTGCATGTGATTGACATTGTCATTGAAAAAGATGTGGAATCAAGCCATGGAAAACTTCATAGTGGAGAAGAGAAGATGAGTTCTACCATGGAAAGACAGAAATTATTAGGAAAACTTTTACGACCTGTTAGGAAAATGAGAGTGCCAGGGCACCCTTATGTCATTGGTCTAACAGGAGGGATTGCCAGTGGAAAGTCGTCAGTCTGCCAAAGGCTTAGGAGCCTAGGTGCAGCAGTCATAAGTTGCGACCAGCTGGGGCATCAGGCCTACACACCAGGGAAGAGGGCTTACAAAGAAATTATCGAGAACTTTGGCAATGGAATTCTTACTGAGGATAAGATTATCAATAGAAGGACATTGGGCTCCATTGTTTTTGCTGACAAGGCCAAGCTCTCATTGCTTAATCATATTGTCTGGCCCGAAATATTGCTGCAAGTACAAGCAGAAATTGCAAGATATGCAGAAGAGGGGTTCAAGGTTTGCATCTTAGATGCTGCAGTTCTCTTGGAGGCTGGCTGGGACAATGCAACTAATGAAGTATGGGTGACATTTGTCCCAGAAAATGAGGCTGTGTCACGCATTCTCTCAAGAGATGGCATCTCCAAAGAACAGGCTTTAAACAGAATTAAATCCCAGATTAGCAATGAAGAACGAGTAAAAGAGGCAAATGTTGCCATTTGCACGCTGTGGGAGCCCGAGTATACTCAAGAGCAAGTTGAGAGAGCCTGGAGAAGTTTACTTGAaagaatttaaattattttgacatTGTTTCTTATCTGATCAGAAGGATTTCAAAAGAATAACCaacatttaatttctctgtACAGTAATCATCCTGAATCATTTGTCAAgatatgagaataaaggaaatcattgCCAACCTAAGGTGTGATCAGTAAATGAAATCACACTGTCAGTTCTTAAAGGAATGTAGATAGTTAGTAGAAGCTGGTAACTCCTACAAGTAAAAAGGTCAGTTGGATACAacgtttttgaatattttgtgaCTAAATGAAATTGCATTGCTAGTACTTAAAGTAAGTGCATAAAGAATATGCACTGATTGTAGGGTTTGAAGGGAAATatacttaaaattgaattttgaaatagtGTAACACTTaaacttttgaatattttgattcGTGAAACATATTTGTGTCATGTAAACTCATGACAAGTGCATAGGATTTTACATATATTGCAATTACGTCtgcagttaaaaataaaaagggtcTCGATTTAGAATTTTTTTGCAAGCATTTCCTTCCCTCTCCCAACTGTAATGTTCAATTCAGAAATTTTAACATCGATAGTAACAAGATGCTAGTAACTGAGACTAGAAGTGAAACCTTGGTGTGACAActttttttgattattttgtaattaaatgaaGTCACATTGCCAGGTACTAACAGGAAATGCATAGAAAATTGTTTAGAGAATATGGACACTGTTTTGGGGGTGTGAGGGATCAATATCTGTTACATTTTGAAATGTGATAACTTTTTTGAACATTTTGTGGtatatggaatttttttttggtcatatCAACTCATGAGAAACACACATGCACTGTAATTATGTCtgcaattaaaaatgaaaaggatttcttctgttttagaattttttgcaattatttCCTTCACTTTCTTAACCATAGTGTTTGATTGAGAAGTCATCAAGTAGATAGTAATTAAATGCGAGTAACTCGTGGTAGTTAAAAGGCTGGTGCAACCCAactttttctaatatttttgtGATTGAATGAAGTCGCATTGTCACCACTTGAAGGAAATTCATAGAAAAGTGTATgaatactgatattagggtttaaagggtaaatataattttagtTCTATTTTGAAATGGTGTGACAACcttttctaaatattttgtGATTTATAAAATTGAGAACTAGggacaaaaaattaaagacaac

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01121 all species →	CoaE	Dephospho-CoA kinase	Domain	Interproscan
PF01467 all species →	CTP_transf_like	Cytidylyltransferase-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001977 all species →	Family	Dephospho-CoA kinase	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR004821 all species →	Domain	Cytidyltransferase-like domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10695 all species →	DEPHOSPHO-COA KINASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004140 all species →	Molecular Function	dephospho-CoA kinase activity	Interproscan
GO:0015937 all species →	Biological Process	coenzyme A biosynthetic process	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02318	COASY; phosphopantetheine adenylyltransferase / dephospho-CoA kinase	EC:2.7.7.3 EC:2.7.1.24	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.