Gene detail

Detailed information of PFX23855.1 in Stylophora pistillata

Genomic Location: Spis.scaffold194:365801...367825
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01287 all species →	eIF-5a	Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold	Domain	Interproscan
PF21485 all species →	IF5A-like_N	Translation initiation factor 5A-like, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008991 all species →	Homologous_superfamily	Translation protein SH3-like domain superfamily	Interproscan
IPR020189 all species →	Domain	Translation elongation factor, IF5A C-terminal	Interproscan
IPR001884 all species →	Family	Translation elongation factor IF5A-like	Interproscan
IPR048670 all species →	Domain	Translation initiation factor 5A-like, N-terminal	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR014722 all species →	Homologous_superfamily	Large ribosomal subunit protein uL2, domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11673 all species →	TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003746 all species →	Molecular Function	translation elongation factor activity	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:0045901 all species →	Biological Process	positive regulation of translational elongation	Interproscan
GO:0045905 all species →	Biological Process	positive regulation of translational termination	Interproscan
GO:0006414 all species →	Biological Process	translational elongation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX23855.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.