Gene detail

Detailed information of PFX24115.1 in Stylophora pistillata

Genomic Location: Spis.scaffold186:229626...238626
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Btbd7

ATGGGGGTAAGCACATCCACATTAGAGCAGAATTTATCTGACCCAACCCTTGTGCGTGTACCTCGATACACATTAGAGGAGAAGAGGAAAAAGCAATCAAAATTTAACACCCTTAAGAAGAAGCTCTCAAGGAGTAAAAGTGGTTTCAAGAGCCATGACCATGGAAAAATGCTGAGAGACTTAACACAAACATGGACTGTACAAGAGATCAATGCTTTAGTTGAAGAATATGAAGCAATGATGAATGTAAAAGAGCTAAAGACTCAAACCAATCTTGTAAGGCAATCTGCACCAAGTTTGAAGAAAGACCTTCTAAGGCTTCTAGAAGAAGGGACTTGTGCTGACACAACACTTGTATTTGAGAACAACCAATTCCATGTGCACAAGGCTATTCTTTCATGTAGATGTCCTTATTTCAAGGATCTTTTATCACAGTATACAGACCAGCATCCTGTCATTCCAATGGACTTTAAAACAGAGGGAATGACAACAGAAATTTTTTCAGCTCTGCTCTGTTACTTGTACACTGGAGACTTTATGACAAAAAAATCAGGCTTAGAATACATTGATGTTCTAATCAATTTGGGTGAAGAGTTTGGCACACCCAATGTTTTGGAACAGGATTTAAACTTACTTTTCAAATGTGGTGAATATGCTGATGTTGCATTTGTTTTTCCAGCTCAAGACTCTTCCGATACATACATGGCTGCAGATGGCAATGCAATTTCTGATCACACGTATGAGATTTTATGCCACAAAGCTATTCTTTGTGCAAGATCACACTATTTTAGATCACTCTTACTCAAATCCGACTTGAGTTCAAACAAATGGAGGACAGGTTCTGGAATGACAAGACTTGTTTTAGATGAATCAGTCATAACTAGGCAGTACACTCGTATAGCTTTACAATGTATATACACAGACTCTGTAGATCTGTCGTCTGTTGTTAAGTGGAGCTCTGAGGACAGGAAATATTGTTCACCCAGAACTCATAAACTTTTGACGTCAGCAGAAATTGCCATGGAAGTATTTGAGGTGGCAAGCTTCATCGATTTACCAGTACTGATACAAGGTTGTGAAGACATAATTTTGGAGGAATTGTCTCCATCCACTCTTCTGCCGACACTGGAATGGAGTTCTCTCCCTCATGGATCTGATTGGGTCTACAGGCAAGCCATGCAGTTCCTACGGGAAGAATTTGTCAACATTGCTCAATCTGAGATGTTTACTTTGATGCCAAGGAAGTATTTGATAGAGGCATTGAAGTCTGATTTCTTGCAGGCCTGTGAACACAATGTTCTACTGTCTGTCATCAAATGGGGTGAGGCACAGGTTATTCGTCAAATGAATGAACAAGATCCAGTCCAGGACAACAAGAAGAATGCCAAGCGACGCGAAATCGATAACAAACAGCTAAAGAGGGTTCTGGCAGGCGTTATCGAACATGTGCGAATTGGTCACGTGCTTCCCCCGCACAGTGAGCTCTTGGACGGGGTGTTCCGCAGGGGTCTTGTTGACCGGGGCATGCCCCTGGATATTGGAGAAGGAAGTTTTTATCCCAATCTCCCATGGATGAGAAGGAGAGAAGAGAGGGACTTTGTCAGACCCAGGCTCTTCTTGCCTTACTTTGAGGAAGCTAAGGTCATTCTTGAAGAACACAAAGAAGCGGAAAAAGAGCTAATTAGAAATCGGGTGTCACGGGCTCCGCACAACATGCCCGACACACTGTACATGTTAGAATCGCACAAAAGGACCTACACTGCACCAGCGACCTTCTTTGCGTCTTTGGCAGCGGGAAGACTGGATCGAGACGATCGACGTCAATCTATGGGTCTGGGCTCTAATAGGGATGGAAACGAGTTGGAAAGATACATGAGAAGCGTGCGAACGAACGAATGGTCTTCAGATGAAAGAGAAGCTGCCATTAGTGGCGCGCCAGTAACAGGGAGAGAGCTTGCTCTCCCGGATGTAGCAATGGAGGCACCATCATGTATCCCGGATGATTATTTGTACAGAAGAGCGGGGCCTTCTGCCGAGATATACCCAGTACCAGATGTTGCCCTTCCCTCCTCCCCAGCGTCCAGTGTGTCTTCGTCCTCTGGTGGTGTTCCCCCGGAATATTTCCATATGGACCTTTTGTTGGAATCTTTAGATGATGACGGAACGATTGGGAGTAGCTAA

Transcript

rna-Spis11318_mrna

GCATGAAATTCATCAACAATTAAGTGAAATTATTTAGGACATTTACAGAAGACGGGAAATATATAGGCTGGGAATATCGTTTGAGACCTGTACATTGGTCAGCTGTCATCTTACACCATGAAATACTCTAGACATATCTAATTATAGGAGAAGAAAATTCCTGGCAATTTGAAGTATGGAGGGACTGATCGAGTGTTTTGATTTGCTTCCAAAACAGCTTAATATCTTGCTACTGTGACCTGAtaagaaatgaaacttttgaaacATTTGATAACACGATCTTGATGTAGTGATTGCAATGGGGGTAAGCACATCCACATTAGAGCAGAATTTATCTGACCCAACCCTTGTGCGTGTACCTCGATACACATTAGAGGAGAAGAGGAAAAAGCAATCAAAATTTAACACCCTTAAGAAGAAGCTCTCAAGGAGTAAAAGTGGTTTCAAGAGCCATGACCATGGAAAAATGCTGAGAGACTTAACACAAACATGGACTGTACAAGAGATCAATGCTTTAGTTGAAGAATATGAAGCAATGATGAATGTAAAAGAGCTAAAGACTCAAACCAATCTTGTAAGGCAATCTGCACCAAGTTTGAAGAAAGACCTTCTAAGGCTTCTAGAAGAAGGGACTTGTGCTGACACAACACTTGTATTTGAGAACAACCAATTCCATGTGCACAAGGCTATTCTTTCATGTAGATGTCCTTATTTCAAGGATCTTTTATCACAGTATACAGACCAGCATCCTGTCATTCCAATGGACTTTAAAACAGAGGGAATGACAACAGAAATTTTTTCAGCTCTGCTCTGTTACTTGTACACTGGAGActttatgacaaaaaaatcaGGCTTAGAATACATTGATGTTCTAATCAATTTGGGTGAAGAGTTTGGCACACCCAATGTTTTGGAACAGGATTTAAACTTACTTTTCAAATGTGGTGAATATGCTGATGTTGCATTTGTTTTTCCAGCTCAAGACTCTTCCGATACATACATGGCTGCAGATGGCAATGCAATTTCTGATCACACGTATGAGATTTTATGCCACAAAGCTATTCTTTGTGCAAGATCACACTATTTTAGATCACTCTTACTCAAATCCGACTTGAGTTCAAACAAATGGAGGACAGGTTCTGGAATGACAAGACTTGTTTTAGATGAATCAGTCATAACTAGGCAGTACACTCGTATAGCTTTACAATGTATATACACAGACTCTGTAGATCTGTCGTCTGTTGTTAAGTGGAGCTCTGAGGACAGGAAATATTGTTCACCCAGAACTCATAAACTTTTGACGTCAGCAGAAATTGCCATGGAAGTATTTGAGGTGGCAAGCTTCATCGATTTACCAGTACTGATACAAGGTTGTGAAGACATAATTTTGGAGGAATTGTCTCCATCCACTCTTCTGCCGACACTGGAATGGAGTTCTCTCCCTCATGGATCTGATTGGGTCTACAGGCAAGCCATGCAGTTCCTACGGGAAGAATTTGTCAACATTGCTCAATCTGAGATGTTTACTTTGATGCCAAGGAAGTATTTGATAGAGGCATTGAAGTCTGATTTCTTGCAGGCCTGTGAACACAATGTTCTACTGTCTGTCATCAAATGGGGTGAGGCACAGGTTATTCGTCAAATGAATGAACAAGATCCAGTCCAGGACAACAAGAAGAATGCCAAGCGACGCGAAATCGATAACAAACAGCTAAAGAGGGTTCTGGCAGGCGTTATCGAACATGTGCGAATTGGTCACGTGCTTCCCCCGCACAGTGAGCTCTTGGACGGGGTGTTCCGCAGGGGTCTTGTTGACCGGGGCATGCCCCTGGATATTGGAGAAGGAAGTTTTTATCCCAATCTCCCATGGATGAGAAGGAGAGAAGAGAGGGACTTTGTCAGACCCAGGCTCTTCTTGCCTTACTTTGAGGAAGCTAAGGTCATTCTTGAAGAACACAAAGAAGCGGAAAAAGAGCTAATTAGAAATCGGGTGTCACGGGCTCCGCACAACATGCCCGACACACTGTACATGTTAGAATCGCACAAAAGGACCTACACTGCACCAGCGACCTTCTTTGCGTCTTTGGCAGCGGGAAGACTGGATCGAGACGATCGACGTCAATCTATGGGTCTGGGCTCTAATAGGGATGGAAACGAGTTGGAAAGATACATGAGAAGCGTGCGAACGAACGAATGGTCTTCAGATGAAAGAGAAGCTGCCATTAGTGGCGCGCCAGTAACAGGGAGAGAGCTTGCTCTCCCGGATGTAGCAATGGAGGCACCATCATGTATCCCGGATGATTATTTGTACAGAAGAGCGGGGCCTTCTGCCGAGATATACCCAGTACCAGATGTTGCCCTTCCCTCCTCCCCAGCGTCCAGTGTGTCTTCGTCCTCTGGTGGTGTTCCCCCGGAATATTTCCATATGGACCTTTTGTTGGAATCTTTAGATGATGACGGAACGATTGGGAGTAGCTAACGATGATCATGAGTGGCTAAATTTCTATCATTCTTAATTAGCAACCAAATTAATATTTCGtgttattttcaaatagttATCTCTAATCCttgttttgtcaaattttggTGAATTCTGGAATTCTTCAAACTCAGCTCTTCAACTTTGAGAGCCTATGATAGCAGAAGTTTATCCTCTATTAAACAGTTCAACGTAGATGAAGCTGCAttcgaaaaaactgaaaaaaccaCCGTACGCGGCGCAATATTGACCATTATCTTGCAAAACATTGGACGCACATCTTAAGGTAACGATAAcctttaagttttgaaattcttaaagTATGTAAGTTATGGACAacgactaaattttttttctaaggataaaaaagaagaaatatttggattaagattaaaaaaaaaaagtctttacaGATGCCATGGGAAATTATGGAATCCTGGGAGATAGAGAGAGTAGTGGACCTTGCAGTACTGAAaccttcaactcccagaagtgat

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006535 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651 all species →	BTB	BTB/POZ domain	Domain	Interproscan
PF07707 all species →	BACK	BTB And C-terminal Kelch	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR011705 all species →	Domain	BTB/Kelch-associated	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR042345 all species →	Family	BTB/POZ domain-containing protein 7	Interproscan
IPR047936 all species →	Domain	BTBD7, BACK domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16064 all species →	BTB POZ DOMAIN CONTAINING 7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0061138 all species →	Biological Process	morphogenesis of a branching epithelium	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10479	BTBD7; BTB/POZ domain-containing protein 7	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.