Gene detail

Detailed information of PFX24635.1 in Stylophora pistillata

Genomic Location: Spis.scaffold171:244082...252495
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

INCENP

ATGATGGCGGTCCTCAATAACCCGACCAAAGAAATGGCACTGGGGTTTTCTTTACATAAACGAGCTCAAGAAGCGATAGGAAAGTTCCAACAAGAAATCGAGGATGACTTTAAGTATCTTAATGAGATTCTATCGGAAGCCAAGCAGCACTTTGGACGGCGAGACAGTTATATTCTTCTTCCAAAGACGCCATCAATGAAAAGAAAGCGACAGGAGAGTGATGAAGAACATAGTAGCGATGATGCTGCATCGAAAACGGCAAGAGAAACAAAAACCCATAAGACCCAAGGATACGCTTCGCCGCTGACGGTTATCAACGAAAACGAACTACCGGACTGTAATACAGTGAACGAGGAATGTTATCAAAAGGATACAAAAAGAACGACAAGAGCAACCAGGGCTAATTCACGAGCAACACAACAACAACCAAAGAGAGGATATGGAAAAAAGAATCTCCCAGATGTAGGAAGTGCCTCTAAAGAGAAAACTCCGGGTTTATCTTCCATGGACGAAAAGCCGAGACGAACCACAAGAAATTCTAAAAAGACGAATTCACAATTGACCAGAGTAACAGAAGAAAACTCGATCTGCTCATCATCAAGTAATGAAGTCAAAGACTTGCCTAGAGGAACCACTAGAGGTTCAAGACGGAAACAGCTGGTGGAAAATGCTGATGTGTCATCATCAGAAGAATTACCAGGGAAACCTGTAATAAAGAATTCTATGTCAAGTATAGATGTCAACCCAAAGGATTTTGAGGATCTTACACCCTTGGAAATTGTTCAACAAAAAACTTTATCACCTTTTAAGGAATCACAAGCAAGGCAAAGCACAGTAAATTCAGAAAAGAAAGATGAATGGACAGATAGTGCTGATACAGAGACTGTTCGTGTTCCAGAAACCCCACATTCCATTCCTATCAAAGCCAAGACACCAACTGCATCTCCCAAGATTTTCAAAACGTCCATCAATGTAGTCCTACAATCACCAGGATTAGGCACTCCAAATGGTGATGAGGTGATAATGTCATCAAGTCTCTGTCATGAGAAAAGTCCAAATTCTTGTGCCTCAAAAGAACTTGGGTCGCAGAAAGTTATATCGAAGGAAACTCAAGTTCCTGAAGAAGAACCTCTCAATAATAGTGACACACATGAACAATCACCCAGAAAGACACATGTTTCATGCCAAGAGTCTATTGAAACCTGTACTGCTGAAAATAAAGATGATGGGGAAACTGGAGTGAAAAATTTGTCTAATGATGAAAACCACCTTAAATCTGAGAATGCAAAAGTTGATTTATCTAAAGAAGTTGTCACAAAGGAAACTACAGAACCCAATAATGTGGAAAAAACTGTAGAGAGAAGTAGAGGAAGAAGCAGTGGATGGCGAAGAAAGAGCAAAAGATTAAGCAACTACAGATCTCCTTCAAGTAGACGACTATCTATCAAACAGAAAGTTACCAAATCAAAAGTACTTGGAAGGAAGAGTCTTGTCAAAAGTTCAGTGAAACTGAAGTTAACACACTCAAAGCTAATGCCAGAATTGAAGATACACAGTGCTGACAAGCAAACCAATGGTGAAAATCTAGAATCTAACCTGGAAGATGTCAAAGTGCGTCTGTTTAGCAGCTCTGAAGACAAGGCTGAAGGCCCAGTGCAAAAGATTGCAGAGAAACCCTTAGAGGATGAATTGGAGGAGGTTTTTCATGACTGCAGAGGATCTGAAAATGAAGACATTGGTAAGACAGATGATAAGAACTACACAGAAGCAATAAGTGAACTTTCACCCATTGTGAAAAATGTCAATTCCTCTGCGATTGTTGTGCATGAAAGTGATGGAAGCAGTGGTGAGGAATTTGCACCCAACTCAAAGGAGATGTCAGAAGATCCAACAACACCCCCTCCACAAGAGCCTTTGAACCCTTCACATAAGGCTAAAGCAAATAATATAGCTGTTGTCCATTCATTTATCAGAAGAAACACGCCTAAGAAGGTTGACCCAGAGGAAAAGAAAAAACAACTACGCAATGCATTGAAAGAAAAAGAAGAAAAAGAAAAAGAAAGGCGAGAACAACTTGAGATTCAACGACAGAGAGGAATCGAGGAACGGAAGAGGAAAAGAGAAGAAAGAGCCAAAAAAGCCGCGGAACAGCGAGTGGCGAAACTTCACGCGTTGGAAGAGAAAAAGCGTCAAGCTCAAGGTCAACGGCAGATCCTGATGGAAAAAGCCAAGAAACTCAAGGAAAAGGAGGAGGAGGACAAGAAAAAACAGCGAATACAGAAAAGAGCCGAGATAGAGGAAAGAAAAAAACAAGAAGAGGCTGTTAGACAGCAGAAAATAAAGGAACAGGAAGAGGATGAAAAACGACAGCGTGAGATGCTTCAGAAAAAACAAGAATTTGAAGAACAGGAGAGGCAACGAAGGATCGTTGAAGCCAAACGTCATCAAGAACATAGGGAAAAGGAGCTGGAGAGAGAGCGAGAGTCAGAGAAACAAAAGAAGCTTAAGGCTATTGAAGAGAAAGAGAAACGGCTTCGCGAAAAAGAAGAAAAAGAAAGAAAGGCACGAGAGGAAAAGCTGAGGATTGAACGCGAGAAAAAGGCACAAGAAGATAAAGAGAGGGAGGAAACGGAGAGAGCGAGAATTGCACAACTTATCCGCGAGAAGGAAGAACACGCGCGACGAGAGAGAGAACAGCGCGCCAAGGAAGAGAAAGAGCGCCAGGAGAAAGAGAAGAAGTTGAAAGAAGAACGAGAAGCAGCCTTACGCGAGAAGAAACGCCAGGAACAGATGGAAAGAGAAAGAGTGCGTGTTCTCGAGGAACGTAAACTCGCCGAAGAAAATAAAAAATTGAATTCCAGCACGACCTGCAACTCCTACGTGATGACCCCGCCTCAAGTTAAGGCGCGAAAACCGGCTTCATCGGAGAATTACGACATTGCTGATCTACAGAGTGATGAGTCAACCGACGATGAAGACAATCCGAGGAAGAGGATACCGTCGTGGGCGCGGCCAGCCGCACTGAAAGCCGCCATTTTTCACCAGGAGTATTCTAACATAGATGTAAACAGTATCTTCGACGATGTTCCGAAGCCGAATTTAGAAGATATTTTTAAGCATGCCACAAAGAAGAAACGGTTCAATCAACGTACAAGTTCGGCAATGTGGGACTCGCCCCCGCTGAGACAAGCCAAGAAAGGTACATATGTTTAG

Transcript

rna-Spis10764_mrna

GTTCTCGAGCGCATTTCATCGGGAAttgtttttactattttttctttgaaacaaaAAGGATTGACTATGTTAATGGCTTAAAGGTAGATTGAGGATTATAGTCATTTAAAGTAGTTACTTCATGAAGAAAATCTACTCTGAATTTCCTGTATGAAAGTGTGAACAACTCGGTGAAATTCATGATGGCGGTCCTCAATAACCCGACCAAAGAAATGGCACTGGGGTTTTCTTTACATAAACGAGCTCAAGAAGCGATAGGAAAGTTCCAACAAGAAATCGAGGATGACTTTAAGTATCTTAATGAGATTCTATCGGAAGCCAAGCAGCACTTTGGACGGCGAGACAGTTATATTCTTCTTCCAAAGACGCCATCAATGAAAAGAAAGCGACAGGAGAGTGATGAAGAACATAGTAGCGATGATGCTGCATCGAAAACGGCAAGAGAAACAAAAACCCATAAGACCCAAGGATACGCTTCGCCGCTGACGGTTATCAACGAAAACGAACTACCGGACTGTAATACAGTGAACGAGGAATGTTATCAAAAGGATACAAAAAGAACGACAAGAGCAACCAGGGCTAATTCACgagcaacacaacaacaaccaaaGAGAGGATATGGAAAAAAGAATCTCCCAGATGTAGGAAGTGCCTCTAAAGAGAAAACTCCGGGTTTATCTTCCATGGACGAAAAGCCGAGACGAACCACAAGAAATTCTAAAAAGACGAATTCACAATTGACCAGAGTAACAGAAGAAAACTCGATCTGCTCATCATCAAGTAATGAAGTCAAAGACTTGCCTAGAGGAACCACTAGAGGTTCAAGACGGAAACAGCTGGTGGAAAATGCTGATGTGTCATCATCAGAAGAATTACCAGGGAAACCTGTAATAAAGAATTCTATGTCAAGTATAGATGTCAACCCAAAGGATTTTGAGGATCTTACACCCTTGGAAATTGTTCAACAAAAAACTTTATCACCTTTTAAGGAATCACAAGCAAGGCAAAGCACAGTAAATtcagaaaagaaagatgaatgGACAGATAGTGCTGATACAGAGACTGTTCGTGTTCCAGAAACCCCACATTCCATTCCTATCAAAGCCAAGACACCAACTGCATCTCCCAAGATTTTCAAAACGTCCATCAATGTAGTCCTACAATCACCAGGATTAGGCACTCCAAATGGTGATGAGGTGATAATGTCATCAAGTCTCTGTCATGAGAAAAGTCCAAATTCTTGTGCCTCAAAAGAACTTGGGTCGCAGAAAGTTATATCGAAGGAAACTCAAGTTCCTGAAGAAGAACCTCTCAATAATAGTGACACACATGAACAATCACCCAGAAAGACACATGTTTCATGCCAAGAGTCTATTGAAACCTGTACTGctgaaaataaagatgatggGGAAACTGGAGTGAAAAATTTGTCTAATGATGAAAACCACCTTAAATCTGAGAATGCAAAAGTTGATTTATCTAAAGAAGTTGTCACAAAGGAAACTACAGAACCCAATAATGTGGAAAAAACTGTAGAGAGAAGTAGAGGAAGAAGCAGTGGATGGCGAAGAAAGAGCAAAAGATTAAGCAACTACAGATCTCCTTCAAGTAGACGACTATCTATCAAACAGAAAGTTACCAAATCAAAAGTACTTGGAAGGAAGAGTCTTGTCAAAAGTTCAGTGAAACTGAAGTTAACACACTCAAAGCTAATGCCAGAATTGAAGATACACAGTGCTGACAAGCAAACCAATGGTGAAAATCTAGAATCTAACCTGGAAGATGTCAAAGTGCGTCTGTTTAGCAGCTCTGAAGACAAGGCTGAAGGCCCAGTGCAAAAGATTGCAGAGAAACCCTTAGAGGATGAATTGGAGGAGGTTTTTCATGACTGCAGAGGATCTGAAAATGAAGACATTGGTAAGACAGATGATAAGAACTACACAGAAGCAATAAGTGAACTTTCACCCATTGTGAAAAATGTCAATTCCTCTGCGATTGTTGTGCATGAAAGTGATGGAAGCAGTGGTGAGGAATTTGCACCCAACTCAAAGGAGATGTCAGAAGATCCAACAACACCCCCTCCACAAGAGCCTTTGAACCCTTCACATAAGgCTAAAGCAAATAATATAGCTGTTGTCCATTCATTTATCAGAAGAAACACGCCTAAGAAGGTTGACCCAGAGgaaaagaaaaaacaactacGCAatgcattgaaagaaaaagaagaaaaagaaaaagaaaggcgaGAACAACTTGAGATTCAACGACAGAGAGGAATCGAGGAACGGAAGAGgaaaagagaagaaagagccAAAAAAGCCGCGGAACAGCGAGTGGCGAAACTTCACGCGTTGGAAGAGAAAAAGCGTCAAGCTCAAGGTCAACGGCAGATCCTGATGGAAAAAGCCAAGAAACTCAAGGAAAAGGAGGAGGAGGACAAGAAAAAACAGCGAATACAGAAAAGAGCCGAGatagaggaaagaaaaaaacaagaagaggCTGTTAGACAGCAGAAAATAAAGGAACAGGAAGAGGATGAAAAACGACAGCGTGAGATGcttcagaaaaaacaagaatttgaaGAACAGGAGAGGCAACGAAGGATCGTTGAAGCCAAACGTCATCAAGAACATAGGGAAAAGGAGCTGGAGAGAGAGCGAGAGtcagagaaacaaaagaagctTAAGGCTattgaagagaaagagaaacgGCTTcgcgaaaaagaagaaaaagaaagaaaggcaCGAGAGGAAAAGCTGAGGATTGAACGCGAGAAAAAGGCACAAGAAGATAAAGAGAGGGAGGAAACGGAGAGAGCGAGAATTGCACAACTTATCCGCGAGAAGGAAGAACACGCGCGACGAGAGAGAGAACAGCGCGCCAAGGAAGAGAAAGAGCgccaggagaaagagaagaagtTGAAAGAAGAACGAGAAGCAGCCTTACGCGAGAAGAAACGCCAGGAACAGATGGAAAGAGAAAGAGTGCGTGTTCTCGAGGAACGTAAACTCGccgaagaaaataaaaaattgaattccaGCACGACCTGCAACTCCTACGTGATGACCCCGCCTCAAGTTAAGGCGCGAAAACCGGCTTCATCGGAGAATTACGACATTGCTGATCTACAGAGTGATGAGTCAACCGACGATGAAGACAATCCGAGGAAGAGGATACCGTCGTGGGCGCGGCCAGCCGCACTGAAAGCCGCCATTTTTCACCAGGAGTATTCTAACATAGATGTAAACAGTATCTTCGACGATGTTCCGAAGCCGAATTTAGAAGATATTTTTAAGCATGCCACAAAGAAGAAACGGTTCAATCAACGTACAAGTTCGGCAATGTGGGACTCGCCCCCGCTGAGACAAGCCAAGAAAGGTACATATGTTTAGAAATGAGAAAGGAGATACCTGTACAATGGaccatttgacttttttttttcgaggcaTTGTGTTCGTTTTAGTTTAACCTTTGAAGTGTATTCTACTATCACAACTGAGATAACAGCTTACGAGTACTAGTGATACATGTATATTTTTAGCAGTCACAGCTCGTAGATCTCACTCGATTTTTGCAGAATGTTTTTAATGCTCTCATTTTCAGCCTAAAGGTGTCAATACGTACATATGGTATTCAGTAGTTTTGCGTAGATTCGGATGTACATTTACACGCCAAATGGGGTACCCACTGTATGCTACATTTCCGGATCGTATTCGTTCCAAGTTTAATTCATGCAAAGTCTTTTCGAAAAGTTTTAGTAATAGGTGGAAGAGAATAAgtgtaattttagtttgaaaaAGTGGATTAAACCTGTCTTAAAATAGAGGGGCGtcgaaattttttaatcatccaCGCTTACAGCGTAATCCTCTCCCTTGCCAATCTCTAAGTTCAAAATCTGGCAGTTATTGAATAGCTAGTGAGACGCATTAAGGAAACTTGTTTAAGAAAACTTGCAAGAGTAAGCGCGGACTAAGGATTTCGCGTTCATCGTTTATCCCGTGTGATCAAGCAGTAAGCAGGTGAAAGCAAAGGCTGACCTCTCTGACGTTCAGAAGAGGTCTAAGAACCTTGACCAATTTAAATTGGATGGATTATCTAGGAATTACCGTTGTAGATTAGAAAATAACGACTGAGGGgcaataatttgttttcagGATGTGATTTTGAAACGATTTAGGCTTACTGTTGTATATAGCTGTTTTTTACTGATCCACGTTTCGCATGTGACACATTTCATATTCGAATAAAATCAGTTGTACCGGACTTAGCGGAGATTTTATTGATCTCATTGTAAGTCACACACAAGTGTATGCAGATCACTACACTTACGCAATAAAGGACTTGAAATGTGC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03941 all species →	INCENP_ARK-bind	Inner centromere protein, ARK binding region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005635 all species →	Domain	Inner centromere protein, ARK-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13142 all species →	INNER CENTROMERE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000281 all species →	Biological Process	mitotic cytokinesis	Interproscan
GO:0000776 all species →	Cellular Component	kinetochore	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0030496 all species →	Cellular Component	midbody	Interproscan
GO:0032133 all species →	Cellular Component	chromosome passenger complex	Interproscan
GO:0051257 all species →	Biological Process	meiotic spindle midzone assembly	Interproscan
GO:0051310 all species →	Biological Process	metaphase chromosome alignment	Interproscan
GO:1990385 all species →	Cellular Component	meiotic spindle midzone	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11515	INCENP; inner centromere protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.