Genomic Location: Spis.scaffold164:310495...324014
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families
| CDS |
| UPF2 |
| Transcript |
| rna-Spis10479_mrna |
| Protein |
| PFX24897.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003459 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02854 all species → | MIF4G | MIF4G domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003890 all species → | Domain | MIF4G-like, type 3 | Interproscan |
| IPR039762 all species → | Family | Nonsense-mediated mRNA decay protein Nmd2/UPF2 | Interproscan |
| IPR016024 all species → | Homologous_superfamily | Armadillo-type fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12839 all species → | NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000184 all species → | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005844 all species → | Cellular Component | obsolete polysome | Interproscan |
| GO:0035145 all species → | Cellular Component | exon-exon junction complex | Interproscan |
PFX24897.1.
