Gene detail

Detailed information of PFX24932.1 in Stylophora pistillata

Genomic Location: Spis.scaffold163:249750...259141
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

AWC38_SpisGene10418

ATGATATCGTTTCGTGTGGCTCTGCTTGTAACGATCGCTTTGTATCAAATAGCCAGTGACGATTTTTGGTCGCAATGTAGATGTTGTGCCACAGCCGAACAGGAGACAGTGGCTGAAAAGGATGAAGTAAAGCGTAAAACTAAATCTGCTGTAGAAATTGCCCTTCGCAAAGTCGCAGGTGTCGAGCAACAGCTTCAAGAACGGAATGGTCAATGTGACAAGGTTGATCTACTGAACATAACTTTTGACGAAAGGAGATGGAAGCAAGAAGCTCTTTTGACGGTGCAAGTGGCTAACCTTATGACATCGCTGTGGCGCTCGCGGGGAAAAGACGGTAATCCCATTGCAGCTAATGACGTACTTCTGTACCACTATGTGCGCTCAATCGTTTTATTTTCGCCATCTGTCTTCGGTTCGGTGATCTGCTTTGATAACTATTTGTACAAGAATTACACACGCTTTTGTCCCTTTGCGTTCAGGGATCCCGAGCTAAACAAAAGCGTTCATGTCATAGATATAGTTGCGGATAACGAAGGATACGACTACACGACGGACAAAAATGCGGTTTGGTGGCACAAACCTAAAAATAAAGCACTTGGTTTCCGTCCCAAGAGCATCACAAGCTATTACGAAGTACGATACAACTTAACCCACACGCAAAAGCTGAAAAAAAAGGTCTTTCCTCATGTGACATTTGAAGATGGGGCATGGACACGACCTTATTTCGACTGCTTTGGGGGAAAAGTTTGGATGGTGACCTATCTGGCCCCATTCTACAACGAAACAGATGACTTCCTGGGAGTAGTCAGTATTGATGTGGTACTTAGTGACATTGACATCAATCAATGTGACGAGCGGGAGTCGTCTGGATCTGATGAAGGAGATGGGAATGGACTTGGATATGCATCGGGGAATTTAGTGGAATTCATGGGCACTCATCTCTGCAAGAAATCAACTGAGTGTCACGCAATCAAGAATCAAGGATTAAAGCGAGGGAGCTACATATGCACATGTAAGCGAGGCTTTTACTTCCCGGACAGTCAGGCGTCTGTGAAGGTTTTTAACGGAACCCTCATTGAGCTCGAACACGATCGACACCTACGGGGCGACCCAAACTCTTACGATGAAGACTTCGAATGCATTCCATGCAGCGTTGGATGCGACGAGTGTGTTGATGACAGACCATGCGTTTACAGCTCTAATATTTATATTCGTTTGACGCTGTTTGCTCTAAATGCACTTGTTATCTGTGTGGCTGTGGTGTTTGCTGTATACGTGTGTATACACTGGAAGGAAAGGCTCATCGTTTCATATTTCGAACCGACAACCCTTCGTTGTATTGCAAGACCTTGGTTGCGTCATATTGGATTTGTCCTGGTGTATGGATCGTTGGCGCTGAAAACATGGAGGGTGGCATTAATATTTCGAGTGCGCTCGGCCCAGAAGCTCGCTTTATCAGACGGAGTACTGCTGAGGCGCCTGGGTCTATTGGTGCTTTTATACTCCGCTTATCTCTCTGTATGGAGTGCAATGGCGCCACCAGACATTGAAGTGGTGAGGACATCCGATGACCTGAAGTATACACGCTGTGTAGAGAATTGGTTTAACTTTACAATCGTATTCGCCGGGGACATTGCGGTGTTGATTTGGGGGATGTGGCTCTGTTACAAGATCAGAAATGCACCAGCAGCTTACAACGAGAGCAAGTACATCAGTTGGGCCATTTATAACGCCATGTTCGTCACCAGTTTCCTTATGGTAGTAAGGATCACGACGAAAAGAACAACCAACCCAGACATGATGTATGCTCTGGACTTTGTTCTGATTCACATGGACTGTTCCACTGTGTTAATTCTGATGTTCATCCACAAGTTTTTGTTGCTACGCCAAATGCAAAGATCAGTGAATAACACGGTTCCATCCAACAATAACAACATACTTGTACCGGACGACGAGATTGTTGTAAAAAGAATGCCCCCTAATCAAGAGGACTTATTGATAAAAGAGAACCAAGTGTTGAAGGACGAGATGCGGCGACTGAGTGAAAAACTGGCTGTTCTTCAGTCTCGCCTTATGACAGATGACAACCATCCAATAGATAATATAACCTCTGGCCGTCGACAGAGTGCTTTCACCATACCCACTACAGATACAAGAAAAGATCTGAAAGATAAACGACTGTCATTACAGCTGCCGCCATCACAGCTGCCTAACTGCGAACGAGACAAGGAAAAGTTTCCCCAGAATCTGACACCCGAAGTTATTGAAAATCAGTGCGTGAGTTTTTCACCACAGGAGCTGAATCCGGCATCATCTTCATCATCCTCCCTCCATTCGGTTTCCGGGAAACGCAGAGAGGTTTCCCAGCAAAACTTAACACCATGA

Transcript

rna-Spis10418_mrna

ATGATATCGTTTCGTGTGGCTCTGCTTGTAACGATCGCTTTGTATCAAATAGCCAGTGACGATTTTTGGTCGCAATGTAGATGTTGTGCCACAGCCGAACAGGAGACAGTGGCTGAAAAGGATGAAGTAAAGCGTAAAACTAAATCTGCTGTAGAAATTGCCCTTCGCAAAGTCGCAGGTGTCGAGCAACAGCTTCAAGAACGGAATGGTCAATGTGACAAGGTTGATCTACTGAACATAACTTTTGACGAAAGGAGATGGAAGCAAGAAGCTCTTTTGACGGTGCAAGTGGCTAACCTTATGACATCGCTGTGGCGCTCGCGGGGAAAAGACGGTAATCCCATTGCAGCTAATGACGTACTTCTGTACCACTATGTGCGCTCAATCGTTTTATTTTCGCCATCTGTCTTCGGTTCGGTGATCTGCTTTGATAACTATTTGTACAAGAATTACACACGCTTTTGTCCCTTTGCGTTCAGGGATCCCGAGCTAAACAAAAGCGTTCATGTCATAGATATAGTTGCGGATAACGAAGGATACGACTACACGACGGACAAAAATGCGGTTTGGTGGCACAAACCTAAAAATAAAGCACTTGGTTTCCGTCCCAAGAGCATCACAAGCTATTACGAAGTACGATACAACTTAACCCACACgcaaaagctgaaaaaaaaggtCTTTCCTCATGTGACATTTGAAGATGGGGCATGGACACGACCTTATTTCGACTGCTTTGGGGGAAAAGTTTGGATGGTGACCTATCTGGCCCCATTCTACAACGAAACAGATGACTTCCTGGGAGTAGTCAGTATTGATGTGGTACTTAGTGACATTGACATCAATCAATGTGACGAGCGGGAGTCGTCTGGATCTGATGAAGGAGATGGGAATGGACTTGGATATGCATCGGGGAATTTAGTGGAATTCATGGGCACTCATCTCTGCAAGAAATCAACTGAGTGTCACGCAATCAAGAATCAAGGATTAAAGCGAGGGAGCTACATATGCACATGTAAGCGAGGCTTTTACTTCCCGGACAGTCAGGCGTCTGTGAAGGTTTTTAACGGAACCCTCATTGAGCTCGAACACGATCGACACCTACGGGGCGACCCAAACTCTTACGATGAAGACTTCGAATGCATTCCATGCAGCGTTGGATGCGACGAGTGTGTTGATGACAGACCATGCGTTTACAGCTCTAatatttatattcgtttgaCGCTGTTTGCTCTAAATGCACTTGTTATCTGTGTGGCTGTGGTGTTTGCTGTATACGTGTGTATACACTGGAAGGAAAGGCTCATCGTTTCATATTTCGAACCGACAACCCTTCGTTGTATTGCAAGACCTTGGTTGCGTCATATTGGATTTGTCCTGGTGTATGGATCGTTGGCGCTGAAAACATGGAGGGTGGCATTAATATTTCGAGTGCGCTCGGCCCAGAAGCTCGCTTTATCAGACGGAGTACTGCTGAGGCGCCTGGGTCTATTGGTGCTTTTATACTCCGCTTATCTCTCTGTATGGAGTGCAATGGCGCCACCAGACATTGAAGTGGTGAGGACATCCGATGACCTGAAGTATACACGCTGTGTAGAGAATTGGTTTAACTTTACAATCGTATTCGCCGGGGACATTGCGGTGTTGATTTGGGGGATGTGGCTCTGTTACAAGATCAGAAATGCACCAGCAGCTTACAACGAGAGCAAGTACATCAGTTGGGCCATTTATAACGCCATGTTCGTCACCAGTTTCCTTATGGTAGTAAGGATCACGACGAAAAGAACAACCAACCCAGACATGATGTATGCTCTGGACTTTGTTCTGATTCACATGGACTGTTCCACTGTGTTAATTCTGATGTTCATCCACAAGtTTTTGTTGCTACGCCAAATGCAAAGATCAGTGAATAACACGGTTCCATCCAACAATAACAACATACTTGTACCGGACGACGAGATTGTTGTAAAAAGAATGCCCCCTAATCAAGAGGACTTATTGATAAAAGAGAACCAAGTGTTGAAGGACGAGATGCGGCGACTGAGTGAAAAACTGGCTGTTCTTCAGTCTCGCCTTATGACAGATGACAACCATCCAATAGATAATATAACCTCTGGCCGTCGACAGAGTGCTTTCACCATACCCACTACAGATACAAGAAAAGATCTGAAAGATAAACGACTGTCATTACAGCTGCCGCCATCACAGCTGCCTAACTGCGAACGAGACAAGGAAAAGTTTCCCCAGAATCTGACACCCGAAGTTATTGAAAATCAGTGCGTGAGTTTTTCACCACAGGAGCTGAATCCGgcatcatcttcatcatcctcCCTCCATTCGGTTTCCGGGAAACGCAGAGAGGTTTCCCAGCAAAACTTAACACCATGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00003 all species →	7tm_3	7 transmembrane sweet-taste receptor of 3 GCPR	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043458 all species →	Family	G-protein coupled receptor 158/179	Interproscan
IPR017978 all species →	Domain	GPCR family 3, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32546 all species →	G-PROTEIN COUPLED RECEPTOR 158-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08469	GPR158; G protein-coupled receptor 158	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.