Gene detail

Detailed information of PFX25107.1 in Stylophora pistillata

Genomic Location: Spis.scaffold159:195156...216686
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Cadps

ATGATTGCCTCATCTTCCGACGAAGAAGATGTTGATGAGGCTGGTGATGTAGACGAACATACACAAGAATTACTGAGCATCTATCAACGCGGCGAACAGACATTCTCTACCACTTCAGCCCCTTCACCAAGCGTAAGTCCATCTCTGCACACGCCGAGCCCTACGCTCTCCGTGGTGTCCGAGGCCACATTACAGGAGCAACAAGAAGACGACGAAAGAAGGGAGAGGCTGCAGTTGTATATTTTCGTTCTGCGCTGTATTGCTTATCCTTTCAACGCCCGACAGCCGACAGATATGGCACGAAGGCATGCTCGGGTTAGCAAACAAGACCTTGTAAAAATAAAACAGCGATTTGAAGATTTCCTCAAAGGAGACACAAAAATAGCTTCTGATGAGGCGTTTTATAACGCAGTAAGAGCCTACTTTGATATATTTATCTGCAGCGAAAGAGTGCAAAAGATGGTAATTAGTGGCGGGTGTTCGTCGAATGATTTTCGTGAGGTTTTCAAGACAATGATCGAGAAACGCGTACGAAGTCTTCCTGAAATAGACGGTATCAGCAAAGAAACTGTGCTAAGCTCTTGGATGGCGAAGAACGATGCGATTTTTCGCGGAGAAGATGACCCAAAAAAGGGCCCAAGAATTGCAGCCTCGGCAGCTTCCGAACTGATTTTGTCAAAAGAGCAACTCTATGAAATGTTTCAGACCATCTTGGGCGTCAAAAAATACGAACACCAAATATTGTTCAATGCTTGTCAGCTTGACAGTGCCGATGAACAAGCTGCATGCATTCGTCGAGAATTGCACGGAAGATGTAAAGCGATTGTAGACCAGAGAAAGCGACTGCCAGGCTTTATACACAAAGATATGGAAACTCTGTTTGTCGAGGAACAGCAGGCTGCTATCAATCAACTGATGGGAAACTTGGAGAGTCAACCAGTGACAAAAGGTTCATCAGACTCCAAGTACTCCATGCCATTTACCAGAATCAAGGGACCCCAGCACACAATCTCCATTGTTGAAGTTGCTGTAGATGATGTGGATTCAGCGGTATCAAAGTCTGATGTTATGTTGAATTTCACAATTGAGGTGATTGTGAAAGAGGCAAAAGGCCTGAAGTCTCTTCCACCAATGAAAATTGTTTACTGTACTATGGAGGTTATTATAAAACCAATTCCTGGTGGATCAGAGCAGCCTGAACTGTATGATGTGGTGACACCCAAAGCTGGGGATAAAATTCAATTGAAAATTGCTGTGAAGATGGATAAACCTGTAAACTTGAAGAAATGCGGGATGATATATGTTCAAGGGAAGACTGTGTGGAAAAAGTGGAAAAAGCGCTTTTTTGTGCTAGTACAGGTGAGTCATTATACATTCGCCATGTGCAGTTACCGCGAGAAGTCTGCAGAACCAACCGAGATGATGCATTTGGAGGGGTACACTGTGGATTACTGCGAAGCAGTCAGTGGCGAAGAACACAAAGGTGGAAAGTTCTTCTTCAAAGCCGTAAAGGAAGGTGATCAAGTCTTTTTTGCCACAGACGAGGAACTCGAGAGACAAATCTGGGTTAATAAACTTTATACTGCCACTGGCCAGTCCCACAAGCCGGTCGCTCCAAATTTATCTGCCATCAGTGTCCAGCCACATTCTAGCAACTCCTTGACAAGACTGCAAGGAGATCATGACCGTGCGAGAAAACATGGCCTTGAGGACTTAATCCAAGCCGATCCGAACAATTTTAACCATCATGTTTTGTTCGAGAAGCTTCAGCACCTGACTCTAACACACAGATTGAACGACTCCTACTCTTGTCTGGGTTGGTTTTCCCCCGGTCATGTATTTGTGCTGGATGAGTATTGTGCTCGATATGGAGTACGTGGCTGCCATGGACAACTGTGTTACCTCAGTGACTTGTTAGACAGAGCAGAGGCTGGCGTTATGATCGACCCAACCCTCTTGCATTATAGCTTTGCATTTTGGGCATCACATGTGCATGGGAACAGGCCGGATGGCTTAGGAACCATTACAGTGGACGAAAAAAACTGGTTCGAGGAGATCAAGATACGCCTATGGAACCTTCTAGCCTTTCAAATCACTCGTTTCAGATATTCTTTTCCTTTCGGGAGACCTGAAGGGGCGCTGAAAGCAACGCTGTCCTTATTTGAAAGGGTTATGATGAAGGATATTTCCACACCAGTTCCACCAGAGGAATTTAGAAAGGAAATCAGAAGTTGCCTCCATCAAGCCGCTCTTGTTAATTATACTCGTGTCTCGGCTTATGCAAAGATTGAAGAGTCGTCCGGAGATCACGTACCACCTGAGACTATACTGAACGACATCATGCATCTGGCGGAACTGTGCATAGATTTGCTTCATCAGAATGAAGAACATCATTCTGAGGCATTGGCTTGGGTGTCCGACTTGATGGTAGAACATCAGGAAATGTTCTGGTCCTTGTTTACTGTTGATATGGATGCTGCTCTGGCCGCTCAGCTGCCCGACACATGGGAGAGTTTTCAGTTGTTTCAACTGCTAAATGAATATCTGTGTGATGATACCAACCTCAATCGTGGGAAATTCCATCGTCATTTACGAGATGTGTTCGCTCCTCTTGTCATACGATATATTGATTTGATGGAGTCGTCTATTGCGCAGTCGCTGCACAAAGGATTTCAAAAAGAGAATTGGATTCCCCTCAGAGATGGGTGCCGTGCCTCTGAGGATCTGTTCTGGAAGTTAACTGTACTGCAGCAATTCATAGCTGAACTAAACTGGCCTGATGAGGTGCTAGCGTCTCATCTTATGAAGAGACTGAAGTTGATGGCTTCAGATATGGTGCAGTCCTGTGTCAAGAGAACGAAGGCTGCGTTTGACAAATGGCTGAAACAAACTAGCTTCAGCCTGGAACTGCTCGTACCTGGGACAGTGTGCGTCATGCTTAATGTCGTCATACAGGCCAAGAAACAGTATCGGTATCACTCAGATGTCAACATTTTTCTCAAGGATGTAATTCAAGAGATGTTTTCATCGTTTATTTCCAAGAATCCTGGTACAGATCTTGAAGACTACTACTTGAATTTCGTCAAACTTAATTTAGAAGTATTTAGAGATTCTTTGAAAGATGAGAAAATGAAGAAGCAGCTAATTAAGGACTGGTATACGTCCATAATAACGAAGATATGCGACTGGCTATCGGACAGAATGAACATGGCGTTACACCAGTATCAGGTCCAGACACTCCTCACAATTGCGGCGGAGCTCCCGCAGTTTGTAAACGAGGATCTATCGTCAAGCCGAGCCATTTATTCTCGAACTTACAAAACAATGTTTTCTCGGCTCCGAATGGAAGACGCCATGTTAAAAGGTGAGAGCATCTACGGCGCAGAAGATCCATCTTACGCCGGAGAAGACGGAGAAGACGACGGCCAGGAGACCGAGTCGAGTGACGAGGAAGCACTAATTAGGTTAGAGACTGGAAACTAG

Transcript

rna-Spis10248_mrna

ATGATTGCCTCATCTTCCGACGAAGAAGATGTTGATGAGGCTGGTGATGTAGACGAACATACACAAGAATTACTGAGCATCTATCAACGCGGCGAACAGACATTCTCTACCACTTCAGCCCCTTCACCAAGCGTAAGTCCATCTCTGCACACGCCGAGCCCTACGCTCTCCGTGGTGTCCGAGGCCACATTACAGGAGCAACAAGAAGACGACGAAAGAAGGGAGAGGCTGCAGTTGTATATTTTCGTTCTGCGCTGTATTGCTTATCCTTTCAACGCCCGACAGCCGACAGATATGGCACGAAGGCATGCTCGGGTTAGCAAACAAGAccttgtaaaaataaaacagcgaTTTGAAGATTTCCTCAAAGGAGACACAAAAATAGCTTCTGATGAGGCGTTTTATAACGCAGTAAGAGCCTACTTTGATATATTTATCTGCAGCGAAAGAGTGCAAAAGATGGTAATTAGTGGCGGGTGTTCGTCGAATGATTTTCGTGAGGTTTTCAAGACAATGATCGAGAAACGCGTACGAAGTCTTCCTGAAATAGACGGTATCAGCAAAGAAACTGTGCTAAGCTCTTGGATGGCGAAGAACGATGCGATTTTTCGCGGAGAAGATGACCCAAAAAAGGGCCCAAGAATTGCAGCCTCGGCAGCTTCCGAACTGATTTTGTCAAAAGAGCAACTCTATGAAATGTTTCAGACCATCTTGGGCGTCAAAAAATACGAACACCAAATATTGTTCAATGCTTGTCAGCTTGACAGTGCCGATGAACAAGCTGCATGCATTCGTCGAGAATTGCACGGAAGATGTAAAGCGATTGTAGACCAGAGAAAGcgACTGCCAGGCTTTATACACAAAGATATGGAAACTCTGTTTGTCGAGGAACAGCAGGCTGCTATCAATCAACTGATGGGAAACTTGGAGAGTCAACCAGTGACAAAAGGTTCATCAGACTCCAAGTACTCCATGCCATTTACCAGAATCAAGGGACCCCAGCACACAATCTCCATTGTTGAAGTTGCTGTAGATGATGTGGATTCAGCGGTATCAAAGTCTGATGTTATGTTGAATTTCACAATTGAGgtGATTGTGAAAGAGGCAAAAGGCCTGAAGTCTCTTCCACCAATGAAAATTGTTTACTGTACTATGGAGGTTATTATAAAACCAATTCCTGGTGGATCAGAGCAGCCTGAACTGTATGATGTGGTGACACCCAAAGCTGGGGataaaattcaattgaaaattgctgtgAAGATGGATAAACCTGTAAACTTGAAGAAATGCGGGATGATATATGTTCAAGGGAAGACTGTgtggaaaaagtggaaaaagcGCTTTTTTGTGCTAGTACAGGTGAGTCATTATACATTCGCCATGTGCAGTTACCGCGAGAAGTCTGCAGAACCAACCGAGATGATGCATTTGGAGGGGTACACTGTGGATTACTGCGAAGCAGTCAGTGGCGAAGAACACAAAGGTGGAAAGTTCTTCTTCAAAGCCGTAAAGGAAGGTGATCAAGTCTTTTTTGCCACAGACGAGGAACTCGAGAGACAAATCTGGGTTAATAAACTTTATACTGCCACTGGCCAGTCCCACAAGCCGGTCGCTCCAAATTTATCTGCCATCAGTGTCCAGCCACATTCTAGCAACTCCTTGACAAGACTGCAAGGAGATCATGACCGTGCGAGAAAACATGGCCTTGAGGACTTAATCCAAGCCGATCCGAACAATTTTAACCATCATGTTTTGTTCGAGAAGCTTCAGCACCTGACTCTAACACACAGATTGAACGACTCCTACTCTTGTCTGGGTTGGTTTTCCCCCGGTCATGTATTTGTGCTGGATGAGTATTGTGCTCGATATGGAGTACGTGGCTGCCATGGACAACTGTGTTACCTCAGTGACTTGTTAGACAGAGCAGAGGCTGGCGTTATGATCGACCCAACCCTCTTGCATTATAGCTTTGCATTTTGGGCATCACATGTGCATGGGAACAGGCCGGATGGCTTAGGAACCATTACAGTGGACGAAAAAAACTGGTTCGAGGAGATCAAGATACGCCTATGGAACCTTCTAGCCTTTCAAATCACTCGTTTCAGatatTCTTTTCCTTTCGGGAGACCTGAAGGGGCGCTGAAAGCAACGCTGTCCTTATTTGAAAGGGTTATGATGAAGGATATTTCCACACCAGTTCCACCAGAGGAATTTAGAAAGGAAATCAGAAGTTGCCTCCATCAAGCCGCTCTTGTTAATTATACTCGTGTCTCGGCTTATGCAAAGATTGAAGAGTCGTCCGGAGATCACGTACCACCTGAGACTATACTGAACGACATCATGCATCTGGCGGAACTGTGCATAGATTTGCTTCATCAGAATGAAGAACATCATTCTGAGGCATTGGCTTGGGTGTCCGACTTGATGGTAGAACATCAGGAAATGTTCTGGTCCTTGTTTACTGTTGATATGGATGCTGCTCTGGCCGCTCAGCTGCCCGACACATGGGAGAGTTTTCAGTTGTTTCAACTGCTAAATGAATATCTGTGTGATGATACCAACCTCAATCGTGGGAAATTCCATCGTCATTTACGAGATGTGTTCGCTCCTCTTGTCATACGATATATTGATTTGATGGAGTCGTCTATTGCGCAGTCGCTGCACAAAGGATTTCAAAAAGAGAATTGGATTCCCCTCAGaGATGGGTGCCGTGCCTCTGAGGATCTGTTCTGGAAGTTAACTGTACTGCAGCAATTCATAGCTGAACTAAACTGGCCTGATGAGGTGCTAGCGTCTCATCTTATGAAGAGACTGAAGTTGATGGCTTCAGATATGGTGCAGTCCTGTGTCAAGAGAACGAAGGCTGCGTTTGACAAATGGCTGAAACAAACTAGCTTCAGCCTGGAACTGCTCGTACCTGGGACAGTGTGCGTCATGCTTAATGTCGTCATACAGGCCAAGAAACAGtatCGGTATCACTCAGATGTCAACATTTTTCTCAAGGATGTAATTCAAGAGATGTTTTCATCGTTTATTTCCAAGAATCCTGGTACAGATCTTGAAGACTACTACTTGAATTTCGTCAAACTTAATTTAGAAGTATTTAGAGATTCTTTGAAAGATGAGAAAATGAAGAAGCAGCTAATTAAGGACTGGTATACGTCCATAATAACGAAGATATGCGACTGGCTATCGGACAGAATGAACATGGCGTTACACCAGTATCAGGTCCAGACACTCCTCACAATTGCGGCGgAGCTCCCGCAGTTTGTAAACGAGGATCTATCGTCAAGCCGAGCCATTTATTCTCGAACTTACAAAACAATGTTTTCTCGGCTCCGAATGGAAGACGCCATGTTAAAAGGTGAGAGCATCTACGGCGCAGAAGATCCATCTTACGCCGGAGAAGACGGAGAAGACGACGGCCAGGAGACCGAGTCGAGTGACGAGGAAGCACTAATTAGGTTAGAGACTGGAAACTAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169 all species →	PH	PH domain	Domain	Interproscan
PF06292 all species →	MUN	MUN domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR033227 all species →	Family	Calcium-dependent secretion activator	Interproscan
IPR014770 all species →	Domain	Munc13 homology 1	Interproscan
IPR010439 all species →	Domain	MUN domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12166 all species →	CALCIUM-DEPENDENT SECRETION ACTIVATOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006887 all species →	Biological Process	exocytosis	Interproscan
GO:0016079 all species →	Biological Process	synaptic vesicle exocytosis	Interproscan
GO:1990504 all species →	Biological Process	dense core granule exocytosis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19933	CADPS; calcium-dependent secretion activator	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.