Gene detail

Detailed information of PFX25710.1 in Stylophora pistillata

Genomic Location: Spis.scaffold144:142585...147146
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis9635_mrna

TGGACAAATAGTCAGCGTGGAACATGAGTTTCTCCGAAATAAAAAGTTATCAttgcttttctattttttactCAAAAGTTGAGATAGAAGTAAGGAGATCCTGAAGAACAGAATGTTGAATTATTTAATAATACTTGCTCTACTACTGACGTCTACTTTGGGAGAACAACAACAAGGACTTGTTttggttaaaagtgatgacgaaAATGGTAATAATGATGAAGTCGAAATAGCCCCAAATACTGAACAATTTGATGAAGAAGACCTTGAAGTTTTTCAGCCATCATCCGAATGGCAATCTATCAAACCAGGTCAAGGGATTCCACCAGGACTCCATGTACGCATGAACCTACAAACTGGAGAGAAAGAAGCAAAACTTATGGAGGGAGATGATGGAACTAAATACAAAACTAACAAGGACTCAAAACAGAAATTTATCAcaattgataaaaatgttatttcaaaGCAGCGTCTTAAAGAGGCTCTTAAGGATTTTAGGGATAAATTTCACGATGAAAACCCTGATGAGGAGTTTTCTGACCAAAGTCATGGTCCATTGCCTGGGGgaAAAACATTCAGGTCAATAGATGAAATCCGAAAGGAATTGGAAggagttgatctttttctgaaaaaggatattgaagaaatttcaaaacatgtTCAGATCCTTAACATTTCAAGTTCCAGTTTAGTGGAAAAGGAGCATGCCTTAGATGAGCTTGAGTATTATGTCCATCAGATAGATAATGCCAGAGATTTGGATAGCATTGGTGGACTCTCCTTGGTGATAAAGTTTATGAACTCTTCTGAAGAGAGCTTAAGAAAAAGGGCGTGTTATGTTTTGGGATCAGCAGCACAGAGCAATCTAGTGGTTCAGCAATCAGCCTTGAATCAGGGAGCATTGCCTTTACTTCTTCGCTTGTTGTCCAAACGTGAACCTATGGTTGTGCGAAAGAAAGCCATGTATGCGCTGTCCTCCCTACTCAGGCTGTTTTTGATGGGGCAGAAAGAATTTCTTAAGCTGAATGGACTTGAAATGTTTGTTAAACTCTTTGATGAGGCAGGCACAGAACCTCTGGTTATCAAAGCAATCACTCTGATGACAGATATACTTACAGAACAAATTGAACATGTCACAAGTCTGCTGAGAAAGCGAGGGCAAGATGTGTCTGGTGATATCTCTGGAAGGGTCCCTTTGCTAAAAAGTATGGTTGAAAAAGGCTGGTGCCAACTTATACCCAGTCTTCTACGTACTACAGAAAATGACACCAGAGAGAAAGTTCTACAGGCCCTTCACGTCATGGTGACTGGATGTAAAAGTGAGTTTCAAAAGGCTCATGTGCAGAACAGCCTAAAGAAACTCAAACTGGAGTGGCTCAAAAATGCCAGTGGTCCAGAATCTAGTGAAAGTTCTGAATATGCTGGAATATTGGCACAACTTGTTACAGACCTCATGAGCAAGTTAACATGATTGTATATTGCAGAGGTTTAGGCAGCATTTTCCTTGAAGGGGAATTTTTTGCATTGCAGCgtgtttaattttgaaagaaatcttcTCTTCTTCCTGGCTTACATGGTGTTGTGCGAACCCTAAGATTCTCCTTGCTCCTTGCATAAGTCTCGCGCAGTCTTTCTTTGGGATATCACGCAACGCTTCCCTAAAGTATTGCGTGACATGCTAAAGAACAGTTGCGAAGAAGACTATGCCTTACGATGGCTCTTGCCTGAAAGAAAAGCCAACGGCAGATAGTAATCTTCAACTTCGCAATACAGTGAAAATGAAACTACAAAAGTTGATGTAGTCAGTGGCCATCGGAATCGCAGAATTTTTACAGTCGAACATAATGGAACCATCAGGATCCCAAAATAACCTTGTCTGACATGTACCTCAGATAACCTCAATTCTATACCAGGACAAAAAGCCTGGTACTTGTAAAATAGAGGTGttagtaataattatatttaagtTTAACTCATTTTCTAACAATCAATTAAGTCAGGCTCTAACACAAGACGTCTCGAATGCTTGGTTTCAGTTAGTTTCCTTCGGAGCCGTTGTTGGTTTCTTCACGAGCGGCTGCGCAAGAGACTATGTCTCTGGGGCATCACTGCGATTGCAAGGATCCTAGCCGTCACATAGGCTTTCCGGCCGTGCAGTCTTCGGGGGCCGGGGGGCGCTTATACACGTATCTCCAGTAAtctgattaaaattaaaatgtttcg

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08609 all species →	Fes1	Nucleotide exchange factor Fes1	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR050693 all species →	Family	Hsp70 Nucleotide Exchange Factors and Inhibitors	Interproscan
IPR013918 all species →	Domain	Nucleotide exchange factor Fes1	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19316 all species →	PROTEIN FOLDING REGULATOR	Interproscan

Gene Ontology

No Gene Ontology signature was detected for PFX25710.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14001	SIL1, SLS1; nucleotide exchange factor SIL1	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.