Gene detail

Detailed information of PFX26134.1 in Stylophora pistillata

Genomic Location: Spis.scaffold133:241361...257524
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

PGD

ATGGGTCAAAACCTAATCCTAAACATGAACGATCATGGATTCGTGGTTTGTGCCTTTAACAGAACTGTTGAAAAAGTTGACAGATTTTTAGCTAATGAAGCAAAAGGCACTAAAGTCATTGGTGCCAAGTCAATGGAAGACATGGTATCCAAGTTGAAGAAACCAAGAAGGGTCATGATGTTGGTTAAAGCTGGTTCTGCTGTTGATGCTTTCATTGCGCAGCTTGTCCCACTTCTGGAGCCCGGAGACATCATCATTGATGGAGGAAACTCCGAATATAGAGATTCAATTAGACGCTGCAAGGAGCTGGAATCAAAAAAACTGTTGTTTGTCGGGAGTGGAGTGAGTGGTGGTGAAGATGGTGCCCGTTATGGTCCCTCTCTTATGCCTGGAGGATCAGATGCAGCATGGGCGCACATCAAACCAATCTTTCAGTCAATAGCTGCTAAAGTTGGATCTGAGCCATGCTGTGACTGGGTTGGAGGAGATGGTGCTGGTCACTTTGTCAAAATGGTTCACAATGGCATTGAATATGGAGATATGCAGCTGATCTGTGAAGCCTATCATCTCATGAAGAATGCCCTTGGCATGTCAACAGATGAAATGAGCAAGGTCTTTGTGGAATGGAATAAGGGAGAGCTAGACTCATTCTTGATTGAAATTACCAAAGACATCCTTGCCTACAAGGATTCTGATGGTACCCCTCTTGTTGAAAAAATTAGAGATTCTGCTGGGCAGAAAGGAACTGGCAAATGGACAGCAATTTCAGCTTTAGAATATGGAATGCCAGTCACTCTTATTGGTGAGTCTGTGTTTGCACGCTGCCTCTCCTCGCTACATGCAGAACGTGTTGAAGCCAGTTCACACCTCAAAGGACCTGCTACCACAAAGTATGCTGGAGATAAAAAGGAATTCATTGAACATATCAGAAAGGCTCTGTATGCATCAAAGATTGTGTCCTATGCTCAGGGCTTCATGTTGATGAGGGAAGCAGCCAAAGAGTTTAACTGGACACTGAATTATGGCGGTATTGCTCTCATGTGGAGAGGAGGCTGTATTATAAGAAGTGTTTTCTTGGGTAACATCAAGGATGCATTTATTAAGAATCCTTCTCTTCAGAATCTGTTATTAGACGATTTCTTCAAAACTGCCATTCACAATTGCCAGGATTCTTGGCGAAAAGTGGTTGCTGCTGCAGTGACTCTTGGGATACCTACTCCAGCATTTAGCACGGCACTTGCCTTTTACGATGGTTACAGATCAGCTCGTCTTCCAGCTAATCTCATTCAGGCTCAGCGTGATTACTTTGGAGCCCATACTTATGAGTTGCTAAGCAAACCCGGTCACTTTGTGCACACCAACTGGACTGGGCATGGAGGCTCCAAAACTGTTATTGTTTACAGCTCATTGTCGGGGAAGTTTTCCGATCCCCTGACGTTTGAAATTAGCGACAAATTGCGACAGCGGACGGTGGATGACTGGAATGACACACCACGGAAATCTCGGCCTCCAGAAGATGAAATGCACGAGAAGTGGATCGTTCTTACAACTGTTAACCCGCCCACAGCAGATGTGAAGAAGTTAGCGGGTATCGAAGGCTGGAAGGTTGTTGTAGTCGGTGATACAAAAACACCTGCAGATTGGAGGTATCCCAATTGTATTTTCCTTAGGATTGAAAAACGAAAGACACTAAGTATCGCATCCATGATTCACTGCCATATAAGAGTTATGGCAGTAGTAGTGCTGAATTCATTTACAATTCGTAAATGTTTAAGATTTTTAAGAGCACAAATGGAAGCACTAAATCAGTCGGAAAACAATAGCACTGAAGACGAAGAAGTGATTGATACAATAACAGTAAATGCTGGAGCATCCCTTAGTGTTCCAGAAAGTGCTTCCTTCGATAGCACGAGAGCGATAAGTTCCGATCAAAAAAGGGAAGAACAAGCAAAGGGGAAGCGTCAAAACCACCAATGTGAGTACACGGGATCGTCTCAAAGAGCTGACCCAAACCAACACTTTGCCGTGGTAAAAGGAAGGCTTAGATGCAACGCCTGCAGCGAAGTTTTCAGTGATAAGAAAAGTTTTTTTGAAAGACACACGAAATCAAAGAAACGTGAGAAGGGCCTGGCTGATATTGAGAGAAATAAATCAGAACAGCAATCCATCAAAGAATGCTTGCAAAAGAGGGCAAAAATTGACATATTTACGAAAAGCTTAGAACTTCAAACTCACAACTTCTTGATCACAAGCTTAGAACTTCGAGCTCACAACTTTTAG

Transcript

rna-Spis9195_mrna

ATGGGTCAAAACCTAATCCTAAACATGAACGATCATGGATTCGTGgtTTGTGCCTTTAACAGAACTGTTGAAAAAGTTGACAGATTTTTAGCTAATGAAGCAAAAGGCACTAAAGTCATTGGTGCCAAGTCAATGGAAGACATGGTATCCAAGTTGAAGAAACCAAGAAGGGTCATGATGTTGGTTAAAGCTGGTTCTGCTGTTGATGCTTTCATTGCGCAGCTTGTCCCACTTCTGGAGCCCGGAGACATCATCATTGATGGAGGAAACTCCGAATATAGAGATTCAATTAGACGCTGCAAGGAGCTGGAATCAAAAAAACTGTTGTTTGTCGGGAGTGGAGTGAGTGGTGGTGAAGATGGTGCCCGTTATGGTCCCTCTCTTATGCCTGGAGGATCAGATGCAGCATGGGCGCACATCAAACCAATCTTTCAGTCAATAGCTGCTAAAGTTGGATCTGAGCCATGCTGTGACTGGGTTGGAGGAGATGGTGCTGGTCACTTTGTCAAAATGGTTCACAATGGCATTGAATATGGAGATATGCAGCTGATCTGTGAAGCCTATCATCTCATGAAGAATGCCCTTGGCATGTCAACAGATGAAATGAGCAAGGTCTTTGTGGAATGGAATAAGGGAGAGCTAGACTCATTCTTGATTGAAATTACCAAAGACATCCTTGCCTACAAGGATTCTGATGGTACCCCTcttgttgaaaaaattagagATTCTGCTGGGCAGaAAGGAACTGGCAAATGGACAGCAATTTCAGCTTTAGAATATGGAATGCCAGTCACTCTTATTGGTGAGTCTGTGTTTGCACGCTGCCTCTCCTCGCTACATGCAGAACGTGTTGAAGCCAGTTCACACCTCAAAGGACCTGCTACCACAAAGTATGCTGGAGATAAAAAGGAATTCATTGAACATATCAGAAAGGCTCTGTATGCATCAAAGATTGTGTCCTATGCTCAGGGCTTCATGTTGATGAGGGAAGCAGCCAAAGAGTTTAACTGGACACTGAATTATGGCGGTATTGCTCTCATGTGGAGAGGAGGCTGTATTATAAGAAGTGTTTTCTTGGGTAACATCAAGGATGCATTTATTAAGAATCCTTCTCTTCAGAATCTGTTATTAGACGATTTCTTCAAAACTGCCATTCACAATTGCCAGGATTCTTGGCGAAAAGTGGTTGCTGCTGCAGTGACTCTTGGGATACCTACTCCAGCATTTAGCACGGCACTTGCCTTTTACGATGGTTACAGatcagcTCGTCTTCCAGCTAATCTCATTCAGGCTCAGCGTGATTACTTTGGAGCCCATACTTATGAGTTGCTAAGCAAACCCGGTCACTTTGTGCACACCAACTGGACTGGGCATGGAGGCTCCAAAACTGTTATTGTTTACAGCTCATTGTCGGGGAAGTTTTCCGATCCCCTGACGTTTGAAATTAGCGACAAATTGCGACAGCGGACGGTGGATGACTGGAATGACACACCACGGAAATCTCGGCCTCCAGAAGATGAAATGCACGAGAAGTGGATCGTTCTTACAACTGTTAACCCGCCCACAGCAGATGTGAAGAAGTTAGCGGGTATCGAAGGCTGGAAGGTTGTTGTAGTCGGTGATACAAAAACACCTGCAGATTGGAGGTATCCCAATTGTATTTTCCTTAGGATTGAAAAACGAAAGACACTAAGTATCGCATCCATGATTCACTGCCATATAAGAGTTATGGCAGTAGTAGTGCTGAATTCATTTACAATTCGTAAATGTTTAAGATTTTTAAGAGCACAAATGGAAGCACTAAATCAGTCGGAAAACAATAGCACTGAAGACGAAGAAGTGATTGATACAATAACAGTAAATGCTGGAGCATCCCTTAGTGTTCCAGAAAGTGCTTCCTTCGATAGCACGAGAGCGATAAGTTCCGATCAAAAAAGGGAAGAACAAGCAAAGGGGAAGCGTCAAAACCACCAATGTGAGTACACGGGATCGTCTCAAAGAGCTGACCCAAACCAACACTTTGCCGTGGTAAAAGGAAGGCTTAGATGCAACGCCTGCAGCGAAGTTTTCAGTgataagaaaagtttttttgaaagacaCACGAAATCAAAGAAACGTGAGAAGGGCCTGGCTGATATTGAGAGAAATAAATCAGAACAGCAATCCATCAAAGAATGCTTGCAAAAGAGGgcaaaaattgacatatttaCGAAAAGCTTAGAACTTCAAACTCACAACTTCTTGATCACAAGCTTAGAACTTCGAGCTCACAACTTTTAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00393 all species →	6PGD	6-phosphogluconate dehydrogenase, C-terminal domain	Domain	Interproscan
PF03446 all species →	NAD_binding_2	NAD binding domain of 6-phosphogluconate dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006183 all species →	Family	6-phosphogluconate dehydrogenase	Interproscan
IPR006114 all species →	Domain	6-phosphogluconate dehydrogenase, C-terminal	Interproscan
IPR013328 all species →	Homologous_superfamily	6-phosphogluconate dehydrogenase, domain 2	Interproscan
IPR006113 all species →	Family	6-phosphogluconate dehydrogenase, decarboxylating	Interproscan
IPR006184 all species →	Binding_site	6-phosphogluconate-binding site	Interproscan
IPR006115 all species →	Domain	6-phosphogluconate dehydrogenase, NADP-binding	Interproscan
IPR008927 all species →	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11811 all species →	6-PHOSPHOGLUCONATE DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004616 all species →	Molecular Function	phosphogluconate dehydrogenase (decarboxylating) activity	Interproscan
GO:0006098 all species →	Biological Process	pentose-phosphate shunt	Interproscan
GO:0050661 all species →	Molecular Function	NADP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0009051 all species →	Biological Process	pentose-phosphate shunt, oxidative branch	Interproscan
GO:0046177 all species →	Biological Process	D-gluconate catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX26134.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.