Gene detail

Detailed information of PFX26222.1 in Stylophora pistillata

Genomic Location: Spis.scaffold131:129764...132971
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09138 all species →	Urm1	Urm1 (Ubiquitin related modifier)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016155 all species →	Homologous_superfamily	Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp	Interproscan
IPR012675 all species →	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan
IPR015221 all species →	Family	Ubiquitin-related modifier 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14986 all species →	RURM1 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0034227 all species →	Biological Process	tRNA thio-modification	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0031386 all species →	Molecular Function	protein tag activity	Interproscan
GO:0032447 all species →	Biological Process	protein urmylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12161	URM1; ubiquitin related modifier 1	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.