Gene detail

Detailed information of PFX26240.1 in Stylophora pistillata

Genomic Location: Spis.scaffold131:134513...138224
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00831 all species →	Ribosomal_L29	Ribosomal L29 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001854 all species →	Family	Large ribosomal subunit protein uL29	Interproscan
IPR018254 all species →	Conserved_site	Large ribosomal subunit protein uL29, conserved site	Interproscan
IPR036049 all species →	Homologous_superfamily	Large ribosomal subunit protein uL29 superfamily	Interproscan
IPR045059 all species →	Family	Large ribosomal subunit protein uL29, eukaryotes	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45722 all species →	60S RIBOSOMAL PROTEIN L35	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0000463 all species →	Biological Process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02918	RP-L35e, RPL35; large subunit ribosomal protein L35e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.