Gene detail

Detailed information of PFX26736.1 in Stylophora pistillata

Genomic Location: Spis.scaffold119:596274...614042
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis8601_mrna

tcaaaatggcggaatcGGAGGAAAACGAAGAAACAGTGGATCATTATGCGGTTTTAAACGTCCGTAGAGAGGCCAATGAAAGTGAAATCAAAGCAGCGTACAGGCGCATGTGTGTGTTATATCACCCCGATAAGCATACTGATCCCGCCAAGAAAAAAATTGCAGAAGAATTATTCAGTAAAGTTCAAAAAGCTCATGATGTCCTTAGTAATCcagaaaaaagaggaatttaTGACATTTATGGCCAAAAAGGACTTGATGCTGGCTGGGAGGTAATTGAGAGGCAAAGGACACCTGCTGAGGTGCGTGAGGAATATGAGAGactgcaaagagaaaaagaggagCAGCACTTACGGCGGATCACAAATCCAACAgGAGGTATTTCTGTAGGAGTGGATGCAACAGACTTGTTTGATAATTACAACTTAATGGATTCTTTGAATGAAAGGGTTTTGCCAAACATTGAAGTTAGTTCCATGTCAATCTCACAGTCAATAGAGGCACCTTTGACTCGCACTGATACACTCACTCTAGCTGGTAATTTAAAGATCAAGAATGGAAATGGAGATGGTAGTGTCTCTGTGTCAACAAGGAGGTTATTTTCACACAGTAAATGGGCTGAGGCCACCTTTGAGGCTGGAAATGGCCCAAATCTTACCCTTCGGGGATTTGCTAACTTAACACAGAGAAGTCATATAATTGGAGGGATTTCCATCAGAGGTGATGGCAGTGCAGTGTCTGGGGGATTACAGTGCATGATAGTACGGCAACTAGACAAAAACACAGTTGGGTATATAACGTACAGAGGAGGTCTTCAATCTTCACTGAATACAACCATCATAACAGAATCTGAAGGCACCAAAGCACAGCTTACAATTCAGcttgGTATTCCACATTCGTTTGCAATGGTGgcatttacaagaaaaatagaaaaggaCACAAAACTCAAGGGCTCCGTTAAAACCGGGACGTTCGGTTCTGTACTTCAATATGgatgtgaaagaaaaatttcagaacACAGCACATTAACAGCCACGATGAGCATTGGGATACCAACCGGTGTGGTGGTCAAAATCAAattgaCGCGTGCATCTCAAGTTTACAACTTTCCAATAAACTTATCAGAAGAGATCCAACCAGCCGCCATATTTTATGGCACGGTCGTTCCAATCGCTGTGTTCTGGGTCGTGAAGATGCTGATTGTTAACCCATTCGTGAAGATGGAAAAGGAAATggAGACAGAAGCTAATAGAACAAAACATGCGAGGCAAATGGCGGAAAAGAAGCGAGAAGCGGAGAGTAGCatacaACTGATGCAAGAATCTTGCGAAAGAATAATTGAATATGAATCATCCCGTCACGGCTTAATTATAGTAAATGCGTGGTACGGACACTTAGTATCTATGGACGAAAGTCCACAGGGCGTTAATCGAGGCCCCAGTAAAGTAATCGATGTTACCGTCCCAGTGCAATGTCAAGTGAAGGACTCGCGACTATTTCTCACAGAGTCCTCAAAGTGTAATCTCAGCGGATTTTACGATCCTTGCCCCGAGGAagaaaagttgttaaaaataagaTATCTCTTCAGAGACGCGGTACACGAGGTTACATACGGAGATAAGGAAGCTGTTCGGATACCAAAACAATCTCACAAAATCCATTTGAGTTGACCATGACAATTTGAAGTGAACCATGTATTATTTAAGCGGTCCATATTTCTGGTGTTCCATGGCGGTCCCAAGAACGGAGTCAAGGAGTATGTTTCAGGATAACATCCTAATAGTTGAGGTGCTTGTGGATTACAATACCGAAACTTAGCCACCCTTGTGGTGCAAAGAGGGAGACATTTTGGGCGCGAAGCCACATATGAAAGAAATGATACACGGCCATCTATTTTGACTTTGAAAGTCCGCGGAGGTACACAGAAAATTGAGTTTTTTCGTGGAGGCCTTTTTACgtataatttttcaaatttgtggCATCTTAGAGATTGATGAATCGGGAAAAAAAAACGAGGAAGTGTACCATATTTACTTTTAAACTTTATTGAAATAAAGTAAACACAAAATCAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11875 all species →	DnaJ-like_C11_C	DnaJ-like protein C11, C-terminal	Domain	Interproscan
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR024586 all species →	Domain	DnaJ-like protein C11, C-terminal	Interproscan
IPR018253 all species →	Conserved_site	DnaJ domain, conserved site	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR052243 all species →	Family	Mitochondrial inner membrane organizing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44157 all species →	DNAJ HOMOLOG SUBFAMILY C MEMBER 11	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042407 all species →	Biological Process	cristae formation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09531	DNAJC11; DnaJ homolog subfamily C member 11	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.