Gene detail

Detailed information of PFX26944.1 in Stylophora pistillata

Genomic Location: Spis.scaffold115:45820...51400
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis8379_mrna

atgatgtttagatgtctgcacgggctagctcgaagAATGCCTTCCGTGGATCAGTTCAAGGCTTCGATGGTCCTAAGTGCTGTAGGGGATGCACTAGGCTACAAGAATGGCGAATGGGAATTCTGTCATTGCGGGGAGACTATTCATCAGCAGTTGCAAACCCTCGGTGGCCTCAAGAAAATTGACATCAAGGGCTGGATTGTGAGTGACGACACTGTATTACACTTGGCCACTGCTGAGGCTCTTGTATCTCCTTGGAAAACACGCGAAGAACTTTTCCTCAAACTCGCTGCAAATTATAAAGCTGGCATGAGAGATATGAGGGGCCGAGCGCCTGGAGGCACAACTGCATCAAGTTGTGCACAACTGAGACCTCTTGTAAGTCAAGGCTATGTGATACCATTTAATCCTAATGGGGGAGGATGTGGTGCAGCCATGCGTTCAATGTGTATTGGTCTGATCTATCACTCTCCAGACAAGCTTGAAGATCTTATTGCCATTAGTATTGAGAGTGGAAGGATGACGCACAATAACCCTACAGGTTACCTTGGTTCTCTAGCATCTTCATTATTCACTTCATTTGCTGTTCAAGGAAAACCTGTTAGGGAGTGGGGTGCCGAATTGTTGTCTACTCTGCCTAAGGCTATGAAGTACATTGAAGAGGTTGGTCGTGACGTAGAAGAGAACAAACAACACTGGTCGTACTTCACTGAGGCCTGGACAAAATATCTTTCACTTCGTGGAATTCTCCAAGGCAATGGTGACCCTGTGTTTCCAGAGCCGTTTCACATTAGGGAACGGGATGCCTTTTACGAATCAGTAAGTTTTAGTGGGTGGGGCGGAGCCAGCGGCCACGATGCACCTATGATTGCTTACGACGCTCTTCTTGGTGCTGGGGCATCATGGGAAGAGCTTTGTAGCCGAGCCATGTTTCATAGTGGTGACAGTGACAGCACAGGAGTGATCGCGGCGGCCTGGTGGGGAGCCTTGTACGGCATGGATAGTGTACCCAAGGGAAACTACAAGAATTTGGAGTACAGAAAGAGAATTGAAAAGGTAGCTGCTGATCTGTTTGCAAAAGCTGGAGATCTTGAATAGATTAGTGGCGAATACTTACAATAACTACAAGGAGAATGACAGCGGCGGTGACGAAAAGACGTCGGCGACGAAACGAAGATTAGAGTGAAGAAGACGACGATGACGGTGACGACACGACGGTTGTAACGAAGACGACAAgataaaaacgataaaaaaactTGACAATGGCGGCAACAGCGTAGACCATTAAATCGTTCTGGCCCACAATAGAATTAGGATTTTATAATATATCATCGTATTACATTATTAGGTTATAAAGTTATTAGGTtctagtaagtaagtaagtaaggactttatttatagagggggacacgtaacagctgaaaagctgacaaacctgtggccctctaactagattatacagcattacaaaaaactgataaataaataaatatataaataattacaaaattctatgatagaaatagcaggatatattaaaaatattcagaaagataaaattaatttataaaaaattaaaattagataatgtgctattgcttaatattgtttcaaagttgtccaggtttttatatgagcttataaaatgctttttcacagctgttttgaatagttttatactaggcttatttttgatatcatggggaaggctgttccataacttaactgcgtcaacactgaatgccttgccaccatcgttatttcttaggtatttgggacacactaaatttaaattgccatgtctagtagacctattgtgtacagaactgttcgtcttgagcaagtctctgatgtaaatcggaacatcgcctttaaggctcttaaaaatcattgtacacttatttagtttgatttcatcaaaaaaaggcaACCAGCCTAGTTTACTAAAGTTTACAACACTTCTAGAATAAGAGTCCACTCCAAGAATTACTCGGGCAGCCCTTTTCTGTAACCTTAGGAGACAGTGGAGTTCTTTAACGTCGCAGATATTCCAAACCATGCTCCCGTACATAAGGACGGGTTTAATCAAGGCGTTATAGTATAAGAGTCTTTCTTTTATTGGAAGGtatctctttatctttttcaataaaccaATACGCTGAGAAAGCTTGGCCTTTAGGCTAGAAATGTGGTCACTAAATGTAAGATCTTGATCGAGTGTTACACCAAGCAATTTATAAGAGGTTACTTGTTCTATTTCGGCCCCATCAAGGGTCACTGACAGGTGATTGCCATCAACTAATGATGAATG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03747 all species →	ADP_ribosyl_GH	ADP-ribosylglycohydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036705 all species →	Homologous_superfamily	ADP-ribosylation/Crystallin J1 superfamily	Interproscan
IPR012108 all species →	Family	ADP-ribosylarginine hydrolase	Interproscan
IPR005502 all species →	Family	ADP-ribosylation/Crystallin J1	Interproscan
IPR050792 all species →	Family	ADP-ribosylglycohydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16222 all species →	ADP-RIBOSYLGLYCOHYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0003875 all species →	Molecular Function	ADP-ribosylarginine hydrolase activity	Interproscan
GO:0051725 all species →	Biological Process	protein de-ADP-ribosylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01245	ADPRH; ADP-ribosylarginine hydrolase	EC:3.2.2.19	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.