Gene detail

Detailed information of PFX27178.1 in Stylophora pistillata

Genomic Location: Spis.scaffold109:432342...439631
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis8139_mrna

ATGCAACagaatttacaaatttttgacTCAATCCGCGGGAAAGAAGTTGATATTCCTTTCTGGGACATAGTTGTGATTACTGCTCTTGACGAAAGTCAAAGAAATGCCTATGATCTTCAACTACAGTCCAAGCTCGCGCGAGGAGAATTACCCCTCGGTGTAAAATATCATGTGTTCTATGACCCACCTGGGCCGAAAATCGGCAACGGTGGATCGGTACTCGTGACTATTGGTgatcttttaaagatttatGAGGAGGAGGAGTTGATGAACTCTAAGATCATTATGTTACCGGCTGGAGGTTTCAGTCAGAGATTGCCAAACGCAAGTGTTCTGGGAAAAGCATTCACTGCCCTTCCTGTTGGTGATCCACCTTACCAAATGTTAGAGCTTCAGCTTGCTATGTTTATTGGATTTCCTCGACATATGAACCCAGGCATTTTTGTGGCTGCTTCAGATATCCTTGTGGTGTTTAATAGTGAAGGAGATTGGTCGTTCACCAAACCAGGCTTCACTGCTTTGGCTCATCCTTCTCCAATTCATATTGGCACAACCCATGGTGTATTTGTGCTAAATGACCACAAAAATTTAACATCGGGTCAGGCTGGCTGCCCAATCATTCAAACAACATGTAAGAAATTTCTCCACAAACCATCAATGGACGTAATGAGAAAGCATGGCATTGTATTCCTCTGCGATGAACAAGAGTATGTTTACACTGACAGTGTCTTTTTTGTGGACTGGAAAACAGCCAAGAATCTTCATGACTTTTCAAAGCAGATCCAACCAATTGACTGTGAAATTGATGCTTATGGTGATTTCTTACAAGCTCTTGGACCTGAGGCATCAGCAGATTACACAGAGAATGTTGCCAATGTCACAAAGGAAACTTCCTCTTTGATTTCAAAGAGGAAGAAGATTTTTGAGTTCTTGAAAGGAACACAGCTAAATGTGCTGTTACTTAATGAATCCAAGTTCTACCATTTAGGCACTACTATGGAATGTATTCACTATTTCTGTGATGACAAAGTTTTTAGATATGAAAGTCACTTTCTCTCAGAAGTCATGGTGCAAAGAAGTGGAACTGGTGAGGAAAAAATTACCACAGATCAAAGATGTCTCATACACTGTTACCAGACTCTGCCATCAAGTGTGGGCCAGCGAACACTGTTGGAATACTGTGACATTCAAGCAGAAGCCTCTGTCGGCAATAATTGCATTGTCAGTAATGTACAGCTTCCTTCAGGGGCTAGCATCTCTGACGATACCTTCATGATGACAGTGTGCGTTACAATCGACAATTCAAGTGGGTTGTATGTGACTGTTGTCTTTGGTATCAAAGATAATGTGAAAAAGACACCACCTTCTGGTGATCTCGGGAAACTACAGTATTTTGGCTTGCCACTTGATAAAGCAGTGTCACTGTTGGATATAGTGCAGgattCCAAACTTGAGTATGTAAGTCTATGGCACATGGAACTGTTTCCTGTGTTTCAAAGCTGTGTGGAGTCTGTTTGTTATTCAATTAAGATGCTGAATGCTTTGAAGAATGGGACAAAAATTGACAAAGGAAACATTGTACGTGTGGGAAAGCACTTGTCCATGAAGGAGATCTTGGATCGTAAGGACATCGAAGGAACATTGTATCTTAGGGAAAagctaagaaagaaaattttaggGACATCTTGAGTAAATGGAAGGAACTTGTATTTGTATTGATAAATGTCTAGATTTCAGATCCCTGCCCTGTCCAGCTTGGTGTTCCACAAGGAAGTATTCTGGGACCGTTGTTGTTTAACATTTACATTAACAGTTTACCTAATGCCATTTCAGATGCTAGGATAATTCTCTACGCAGATGATGCTGTATTACTTTGTGCGGGATCAACTGCAGCGGAACTCGAAGAGTCCTTGTGTCTTGGTTTTACGCAAATTTGTAACTGTTACCATGACAACAAACTGACCTTGAatgttaagaaaacaaaactgatgCTGACTGgaagtaaaaatgtaaaatgtactGACATCTTTTGAGGACTTTCAATTTAAATCTGATGATGATGTGATCATTGATTGTGTGAAATCTTTTAAATACCCTGTAGTGACAATTGACAAAAAATGGAATTGGAGGCCTCATATTCGAAATTTGATCAAGAAGTTAGGTCAtcgtaagtaagtaagtaagtagagTTTATTGGAGAGGGTGACATTTGACAGTAACTAAACTGCTAACCTAATGGCCCTCGAAGtaaatacaagagaaaattaatcaaaaactGACCGACAATAATTTATATAATCACACTTGCCATATGCTTGACGAAAAGACTTGCCTTGCGTACTACAATGGTTTGGTGCTACCTCATTTAGACTATGCGGATATAATATGGGGCGATCGACCAGGGTTAAAATCAGAAGTGGAACAGCTACAGGCCTTCCAAAATAAGTTTGCTAAAAAAGTCTATGGCAAAAAGGCCTCCTCTAAAGAGGCAATAAAAGGAGTAATGTGGTTGCCTTTGGAATTTTGTTGTCATGGGCATCGTTGTGTACTTGGTCAGAATGcaataaaaggaaacattcCTGAATACTTTGATAACTTTAAATCAACACTAAATTCACATGGTTACAACACCAGAAATGGACACCTTCGACGCTTTGGCAGAATTAGAACAGAATGCGGATGATGTATAACATGTTATCAACCAACAAAGGAATGGTTAGCACTTCCACCTGAGTTGAAAAAGCCTGTGCCACCAATAATTTTTAAGAGACAcctaaataataatatttttaaattacctTATAAACCTTAGCATATTcttaattttagtattttaatcTTAGTGCTTTTATATGCTTCTATACATCTACATGTacaaatttttctcattttttcctaatttaattgtatttttagtCAGAGGACCCCCCTGACAACCACTTAATATGATG

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007545 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07959 all species →	Fucokinase	L-fucokinase	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012887 all species →	Domain	L-fucokinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15045 all species →	FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016772 all species →	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00976	FPGT; fucose-1-phosphate guanylyltransferase	EC:2.7.7.30	Amino sugar and nucleotide sugar metabolism	ko00520	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.