Gene detail

Detailed information of PFX27426.1 in Stylophora pistillata

Genomic Location: Spis.scaffold103:549255...553792
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis7868_mrna

ATGTGTAGAAAAGTGTACGAGGCACTTCGAGGTAAGGGCATCCAAGCCCAAGGGTTTTATACAGAGGAGGTCCGCAACAGCCATACAAGGAGTAGGGTGGGGTTTGATGTTGTCACTCTGAATGGGCAACGTGGACCTTTAGCAAGAACAAAAGGTGAGGTTCAATCTGCAAGAGAACGAGCATCACCTTCAGTTGGCAACTACTCAGTGGATGTCAAGTCATTTGAAGAGCTTGCACTTTCGACAATCATGATTAACACTGAAAATTCCACCAAGGTTACCCCAAATAGAAAGATTATGTTTATCGTGGATGAAATAGGAAAAATGGAACTGTTCAGTGACTGCTTTGTAAGAGCAGTTCGTGAACTGTTTTCTTCTCCACAAGCCACAATACTGGCCACTGTACCTGTAACAAAACAGCGACCCATCCCATTTGTGGATGAGTTGAAGAACAGACGAGATGTGACCTTGATTGAGGTCACGAAGGGTACACGAGATGAATTGGTCAGTGATGTTGTACGGCTTCTTGAAGATTCTCTTGTCATAACGTAAATCAATGgctgtttttcctttaagtgaCCTGTAGAAATCCTGTTTTCTGCAGAATTTCTACACCTGGATTTGGGGTTCAATGTGATATATATGATGCCGCTTTATGGGATAGAGAAGTTTGCAGAGCAGGCGTGCGGCGAGCCATTGCTCAATATTTTCTTGGTGAAAGTTGTAGCTGCCATCTTTTTACAGCAGCGGAAGgttggggagagaaagaaatttgtgtaAGGAGAGGAGAGGGCTGGGGCCACGCCCCCTCCCCCACCATCCAATGTAACAgtaaatcaaacatggccggCCGGGGAAACGATATTGAAATTGTATCACTACCTCGCTCTAATAAGACGTCGTAGGCTTAATGGGATTGAGCTGTGAAAAAGGAGAGTTTAAGAGGATAAATACAAATGCAGTCTTAATACACTTAAAGTGCTTAAAATTTACTGGCTCGCTCATGTCTGAAATTTAAAATGCTTTCAaccatttttaagaaaactggTTACCATGGAGTTAGAGTTTCTTAACGTCGCAAAAGCTACCGAAACTATGTTGACACATTTGCTTAGATGTGAATGTCATTTTAACTTGACGTTAGTAAAATGGTCAGTTTGCTTCGAGCATTATTTGGCTGCATTAGCGACGGTTCTCCGTTATCTTTTGACTCTTTAAATTTGTCTACCGCCATTTATAAGATATATTAACACCGTTTGTTATACTGGCTCTCGTTTCTGTTCATTACTGCACCATCGACAGCCAcctatggaaaaagttattaaaatcCATAGGCCgggtaaatttttaaaagttatccAAGAATAATTCTAAAATCGGAACAAACGAAAGTTTTAGTCTTACTATGTAATTTCCTATCTATCAAACAGTACACGCAgcgaattattttattttaaaatacaatcATATAGATACTTACAAAGGGAGTGGTATTTTCCATGACCTGGCgttaaaagtgattttttctttccagtaaCTGTCAAAACAGCGGGAGACAATTCCCAAAACAAGaccattgaatttttttttttagcctttcttGTGTAATATTTACATTTCAGCTGTTATAAAATTCCTTGTGGATCTATAAATAGGGGAAGTTAACTTCATCCCCAGAAACACCCTCTGGCGGATAAGTTTGTTGAATCTTACCAAGCGGCGGCCGCCGGTTTGTGAACGGCTGAGCCCGGAAAAGGGGCCGCAAGGCAAAACCCCAAATACAAAGGCCTGCTCGTAAACGGCTGTAAAAGGTCTGATAGACGGCGGCAAGTAGCTTTAATTGAAATCCTTGTTGTCTTACCACCTTTTTGTTTGGTTATGTATAGATAACGTAGGGAGGCGTTATATATCGATCAGTCCTTGAAATTGAAAGGCAAACCCTGAATAGTGGAGATGCCAGTCTGGACTGAATATCATCAATGTTAATTGTCTGTATTTTAAATACAAGTATTAAAAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03266 all species →	NTPase_1	NTPase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR004948 all species →	Family	Nucleoside-triphosphatase, THEP1 type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43146 all species →	CANCER-RELATED NUCLEOSIDE-TRIPHOSPHATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0017111 all species →	Molecular Function	ribonucleoside triphosphate phosphatase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06928	NTPCR; nucleoside-triphosphatase	EC:3.6.1.15	Thiamine metabolism	ko00730	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.