Gene detail

Detailed information of PFX27873.1 in Stylophora pistillata

Genomic Location: Spis.scaffold94:574095...575819
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01163 all species →	RIO1	RIO1 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000687 all species →	Domain	RIO kinase	Interproscan
IPR017407 all species →	Family	Serine/threonine-protein kinase Rio1	Interproscan
IPR051272 all species →	Family	RIO-type Ser/Thr kinase	Interproscan
IPR018935 all species →	Conserved_site	RIO kinase, conserved site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45723 all species →	SERINE/THREONINE-PROTEIN KINASE RIO1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0030490 all species →	Biological Process	maturation of SSU-rRNA	Interproscan
GO:0030688 all species →	Cellular Component	preribosome, small subunit precursor	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07178	RIOK1; RIO kinase 1	EC:2.7.11.1	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.