Genomic Location: Spis.scaffold91:149233...162326
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families
| CDS |
| RAD23B |
| Transcript |
| rna-Spis7257_mrna |
| Protein |
| PFX28029.1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | ULD|UBL|NEDD8 · all ubiquitin genes in this species |
| Ubiquitin family | UBD|Alpha-Helix|UBA · all ubiquitin genes in this species |
| Ubiquitin family | ULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species |
| Ubiquitin family | ULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00240 all species → | ubiquitin | Ubiquitin family | Domain | Interproscan |
| PF09280 all species → | XPC-binding | XPC-binding domain | Domain | Interproscan |
| PF00627 all species → | UBA | UBA/TS-N domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015940 all species → | Domain | Ubiquitin-associated domain | Interproscan |
| IPR000626 all species → | Domain | Ubiquitin-like domain | Interproscan |
| IPR015360 all species → | Domain | XPC-binding domain | Interproscan |
| IPR009060 all species → | Homologous_superfamily | UBA-like superfamily | Interproscan |
| IPR004806 all species → | Family | UV excision repair protein Rad23 | Interproscan |
| IPR036353 all species → | Homologous_superfamily | XPC-binding domain superfamily | Interproscan |
| IPR029071 all species → | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR006636 all species → | Domain | Heat shock chaperonin-binding | Interproscan |
| IPR041811 all species → | Domain | RAD23A/RAD23B, UBA1 domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10621 all species → | UV EXCISION REPAIR PROTEIN RAD23 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0003684 all species → | Molecular Function | damaged DNA binding | Interproscan |
| GO:0006289 all species → | Biological Process | nucleotide-excision repair | Interproscan |
| GO:0043161 all species → | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0005654 all species → | Cellular Component | nucleoplasm | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0031593 all species → | Molecular Function | polyubiquitin modification-dependent protein binding | Interproscan |
| GO:0043130 all species → | Molecular Function | ubiquitin binding | Interproscan |
| GO:0070628 all species → | Molecular Function | proteasome binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10839 | RAD23, HR23; UV excision repair protein RAD23 | - | DNA repair and recombination proteins | ko03400 | deepkoala |
