Gene detail

Detailed information of PFX28433.1 in Stylophora pistillata

Genomic Location: Spis.scaffold83:399717...411234
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|PH\|GLUE · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07289 all species →	BBL5	Bardet-Biedl syndrome 5 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR006606 all species →	Family	Bardet-Biedl syndrome 5 protein	Interproscan
IPR030804 all species →	Family	Bardet-Biedl syndrome 5 protein/sex-determination protein fem-3	Interproscan
IPR014003 all species →	Repeat	DM16 repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21351 all species →	BARDET-BIEDL SYNDROME PROTEIN 5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0032266 all species →	Molecular Function	phosphatidylinositol-3-phosphate binding	Interproscan
GO:0034464 all species →	Cellular Component	BBSome	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0046907 all species →	Biological Process	intracellular transport	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16748	BBS5; Bardet-Biedl syndrome 5 protein	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.