Gene detail

Detailed information of PFX28509.1 in Stylophora pistillata

Genomic Location: Spis.scaffold82:448689...456891
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07743 all species →	HSCB_C	HSCB C-terminal oligomerisation domain	Domain	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009073 all species →	Domain	Co-chaperone HscB, C-terminal oligomerisation domain	Interproscan
IPR004640 all species →	Family	Co-chaperone Hsc20	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR036386 all species →	Homologous_superfamily	HscB, C-terminal domain superfamily	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14021 all species →	IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051259 all species →	Biological Process	protein complex oligomerization	Interproscan
GO:0001671 all species →	Molecular Function	ATPase activator activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0044571 all species →	Biological Process	[2Fe-2S] cluster assembly	Interproscan
GO:0051087 all species →	Molecular Function	protein-folding chaperone binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX28509.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.