Gene detail

Detailed information of PFX29210.1 in Stylophora pistillata

Genomic Location: Spis.scaffold69:301236...306173
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis6016_mrna

ATGGTGGTTCGTTTGCATCACGTTGAAGTACTCTGTCAAAATCTTCAGCAAAGTTTAAGGAAATTCTGCGGAAACTTTGGCTTTAGAGTGCTTGCTTCGTCTTCCTTTCCCAATCGGGTCACTCTGAACCGGGACtctataaattttgttttgagcgaAGGCGCCAGTGAACGAGACACCGTTTACAACGTTGCCCTTGAAGTCAAAGATGTGAAACAAGTGGTGGATATCGTAGAAAGAAATAGCGGTAAAATAATCAGAAGACCAGAAACATTCGCTGATCGTAACGGAGTGGTGGAATCCGCTGTAATACAAACTCCTGTCGGAAACGTTGTTCACACATTGTTAAATGCTTCTAGTTACAACGGTGTGTTTTTGCCGGGATTTCATGAAAGTGACAATTACAAGATGGCGTTACCCGAAAGGGTAGATTATGTAACCCCATCGAACTCGACTAACAAGAATTCAGTTATTGGCGATCGTCTTTTAACACACTTTGATCACATAACGTTTGCATGCCCGTTAGGGACTTCTCCGTCGATTATGAAATGGTATGAGCGATGTTTTGGCTTCAGTAGGTTTAATATCAGCTCTGATGAGAAGTCAGAGGGCTTCATTGTGCAGAGTTCAATACAAGGAGCGAGCATTGGAATGAAGCTGACAGCCATGCAGTATTGGTTTTGCTCGGAATCAGAGCTAAGAATAAACACTGATGAACCAGGAGGTGGtgtcaagtttgtttttgcagAACCACTACCGGGACAAGgcCCTAACCAGGTACAGACATTCTTAACAGAACATGGAGGACCAGGTATACAGCACATAGGCCTGCATACACCAAACATAGCTGAAGCTGTTGCTACCTTAAAGGACAGAGGAGTCAAATTTATTGATCCTCCATCTGCTTATTATTCTGAGGAAGGTAAACTTCAGGAAATACGAGATGTAGGAGAGAGTGTGGAGTCTCTCCAGAAACATGGTATTCTGTTGGATGCAGAGAGCTTCACGTCAAGTGAAAGCACAGCCTCAtgtttggaaaatatgaatGTATGCCAAGATGCTGACAACAAGTATTTGATGCAAGTTTTTACTAGACCACTTTTTAACAAAGACACCTTCTTCCTGGAGGTTATTCAGCGCTGTGGGGCCACAGGATTCGGAGCGGGCAATATAACTGCTCTGTGGAAAGCTGTTGATTCATATTTAAATAATGAATCAAATAAAAGTAATTCTTAAAACTCATGGACATCTTAATTTTGTTCATAGGGCATTGTCACATTTGACTGGCAGAGATTGATCTGTGCTGAgtgttaaataatttttccgaCACCTGAATGTGGCTTTGAAATATTTGCAGTGTTTGATGATGGAAGAAAAGTTTCCACTTcctaaaaaatggaaaatagtttattaaaaacatttggGTCAAACCTCTTGAAAGTTAGTGATATTACTGTCttttaaaaaagccttttaAACTGTCATTGTAGCTTTTCTCAACCCCCTTTCTCCTACAGAATTGACCAGAATGTAAACTCTCTCTCTACTCTATCAAAGAGACAGttcatgagaattaagaaaattaatgacTAGGATATATTGTTAAGTAGAAATTACTTAGTTATAGAGGGGTGTATTGTAGTCAGTTGGGAGAGTAATGTTTTTTATCTTTGGAATTAAAGCAATGCTGtactccctcccccccccccatacaTGGGGATGGGGGGGAGAAGAGAAAATGTACCACACCCTGATTGATATTGGGTGACCCAGTGGCTTAATGGTCATTGCTTTGGACTCCCAGTCAACTCATGGATATTCCAATGGTAGTGAATGGTGGGAACTGAAAAACCTAACTCGGAGCTaagttacatttaaaaaaaaaattgtatttacatttttttgaaGCTGGCAAAGATACACACTGACTGAAAATGACAACCTGGAGAATAAGGCTGAATTTCTTAATACCTTGAAAGTTCCATAGCCAAATTAGCCTTTATCTTTCCTCAATTACGCTccattcaaaaggcaaagtcACATGCTCGAGCTTACACCTCACCACACTCCCAAACACATCTTTCGGGACACAGTCTCCTTCACCTGCTTCTCTCGTTGTGGGTCTTCAAGATAGCATAGAAACACTGGCAGTTAACAACATTGGAAAGGTAAGAGGGACAAAAGAACCTTATGGAAGTTGTTTGAGCAAAGTGTTGCAACCATTTATGTTGGGGAGTGTAGCTTTACATGTACCCAACAGTTTTTGCCATGAGCTTATTTCAAGCACAAAGAACTTGTTCACTCCCTTGTCAGTTTTGGGTCTGTTAATATCTTTGTCAAGTACTTATACTGATATTTAATGCTCTTGCCATGGAGGTAAATAATTATGGTTTAATGAACTCAAACTGAAAGAgatgacaattttttaaaaatacatgaatTAAGTTGCGTATCGAAAGAAAAGCCGCTGGCAGGCTTCAGTCATtctttttcaagtatttttatttgaaagttgGGTAAAGGATGTACATTTCAGATcctcaaaataaattgtttctcAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13669 all species →	Glyoxalase_4	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037523 all species →	Domain	Vicinal oxygen chelate (VOC) domain	Interproscan
IPR005956 all species →	Family	4-hydroxyphenylpyruvate dioxygenase	Interproscan
IPR029068 all species →	Homologous_superfamily	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	Interproscan
IPR041735 all species →	Domain	4-hydroxyphenylpyruvate dioxygenase, C-terminal	Interproscan
IPR041736 all species →	Domain	4-hydroxyphenylpyruvate dioxygenase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11959 all species →	4-HYDROXYPHENYLPYRUVATE DIOXYGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003868 all species →	Molecular Function	4-hydroxyphenylpyruvate dioxygenase activity	Interproscan
GO:0009072 all species →	Biological Process	aromatic amino acid metabolic process	Interproscan
GO:0016701 all species →	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24788	HPDL; 4-hydroxyphenylpyruvate dioxygenase-like protein	EC:1.13.-.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.