Gene detail

Detailed information of PFX29631.1 in Stylophora pistillata

Genomic Location: Spis.scaffold63:274696...300608
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

fech

ATGACACGAGCAAGGGACAAAGAAAAAGTTCTGAGTCCCCATGAGGAATTGAACCTCAGACCTTCAGATTCTGCTCTCGGATGCTCTACCACAGAGCCACAGAGACTATATTCCGAGCAAGCCAACTTGAAACCAAAAACAGGAATAATGCTTCTGAATATGGGAGGTCCAGAGACAACAAATGAGGTTCATGATTTTCTCTTGCGACTTTTTTCTGATCGTGACCTTATGGTTTTACCTGCTCAAAGTAAGATGGCTCAATGGATTGCCAGAAGAAGAACCCCTAAAATCCAGGAACAGTATCAAAAGATAGGTGGTGGCTCTCCTATCAAAATGTGGACTGAAAAACAAGGAGAGGGAATGATAAAACTGCTTGATGACATGTGCCCCGATTCAGCTCCTCACAAGTTTTATATTGGATTCCGTTATGTGAAACCTTTAACAGAGGAAACTTTGGATCAGATGGAAAGTGATGGTATAGAAAGAGCTGTGGCTTTCACTCAATATCCTCAGTATTCCTGTTCCACAACTGGGAGCAGTTTAAATGCAATCTACAGACATTACAAGCAAAGAGGAGAGAAGCCTGGAATCAAATGGAGTGTCATAGACCGGTGGCCAACCCATCCTGGTCTTGTTCAGGCCTTTGCAGAAAACATCCAGGCAGAGTTAGCAAAGTTTCCTGCTGATGTCCAAAACGAAGTGGTTATTCTGTTTTCTGCCCACTCTCTTCCAATGAAGGTTGTCGATAGGGGTGACCCATATCCTCAAGAAGTTGCTGCCACAGTACAAAGGGTGATGGAATCATTGAACTACTCCCATCCATACAGACTTGTTTGGCAATCAAAGGTGGGCCCCATGCCATGGCTTGGACCTCAGACGGAGGATTCAATTAAGGGCCTTGCAAAGAAGGGAAAAAAGAATATCCTTTTGGTTCCCATCGCTTTCACCTCTGACCATATTGAGACACTTCATGAGCTGGATATAGAGTATGCAGAAGAGGTTGCTCACGAGGTTGGTATCGAGAATATCCGAAGAGCAGCTTCACTGAATGATAGTCCAACTTTTATCAAGGACAACAACCGTGTGGCTTCACGCCCATCTCTCAGTCACGTGTCATTGGAGGCCAAGATGCGAAGCCTGGAGCTTGGCCTTGGCAGAAATCCTGCCAATTACAGAATAGTCGTTGGTGATCACAACCGAAATGCTAACGAGGGAACTGAAGAGTCGGTTGGCGCCAAGCAAATCATTTCTCACCCCGAATACAATCGACCTGGTAGACTCAACAATGACATCGCCCTGATTGAACTCGCTAGGTCTGTGAAACTCTCTGTCAGGGTGAACCCTGTGTGCCTGCCATCTAGCGACTCAGATGTACCTACGGGATCAAAATGCTACATTACAGGCTGGGGAAAGATTAGACATCCTGGAGCTTCTCATCCTATTTTACAGCAAGCCATGATACCGCCTATTGATCCAGCAAAGTGTCGGCAGAAGATTCAAGCAAGTGGAGTTTCAATACAGTTGACTCGGCAAATGTTGTGTGCCGGCGTGGAAAATTCCATTTTAAGTGGTTGCCATGGTGACAGTGGAGGCCCGTATGTCTGCTTGAATGGGGATGGGACATACACCTTGCACGGTGCAGTAAGCTGGGGTTCTTCCAGATGCGATGCTAAACAACTTTTTACTGTGTTTGCCCGGGTGACCCAGTACCGAGCTTGGATCAAACAGCACACTGGGTTAAGTGGAGGAGGAGGTTCACCGCCACCAGTGTCTCCTGAGTGTTCAGGTTACCACGTCCTGAGCGAAAGTGACCGCAACAAAGGCTACAAAGGAGTTGTAAAATGTGACCGGCCGTTGCCCGCTGGAAAACGCTGGTATAGGTTTCAAGGAGAGGCAGGCTCACAGATGCCAACACAGTGTGTGCCTAGATATCAGTGTGGTACCCATGCTCCGGGCTGGCTGAGTGGCGCCCATCCCACAGTGGGCGAGGGAGCCGTTCAGCGCAAAGTGTGTTTCCATTGGTTGTCAAACTGCTGTAATTGGTCCAGTAACATTAGAGTGCGTAACTGTGGCGGTTTCTTTGTGTACGAGTTGGTTGCACCACCCGGATGCAGCATGCGATACTGTGGAGAGAATGTTCAAGGAGGCACGCCACCACCTCCAAGTTCTTCGCCACCTCCAACTGTTTCTGTTTGTTCCAACTACAAAGTCTTGAACGAAAGCGACCGTAACACAGCTTACAAAGGGGTTACCAAATGTGACAGCTCAATTGGAAAAGGCTGGTACAGATTCATGGGAGATGCAGGCACACAGATGCCAACTAAGTGCGTTCCTAAATATCAGTGTGGTACCCATGCACCGGGCTGGCTGAGTGGCGCACATCCCACGGTGGGGGAGGGAACCGTTCAACGCAAAGTGTGTTTCCATTGGTCATCGGGCTGCTGTCAGTGGTCCAGTAATATCCAGGTTCGTAATTGCGGGGGTTTCTTTCTGTACGAGTTGAATCGGCCACCAGCCTGCAGTTTGCGATTTTGTGGAGAGAAACCTCAAGGTTGTGGTTCGTCAACGCCTCCACCTCCTCCATTGCCGACAACGCCGGTTAACGCACCAGAATGTTCCAACTACAAAGTCCTGAATGAAAACGAACGTGCTAAAGGATATCGAGGTGGAATCGTCAAGTGTGACCGCACTGATCGCACTGGTTTTGTGAAGGCCTGGTACAGATTTGAAGGAGGTGCCGGTGACCAAATGCCTGATACCTGTGTACCAGTTAATCGTTGTGGTACGCATGCTCCAGGCTGGCTTAGTGACGGTCACCCCGCAGTGGCTGAAGGGGCTGCCTCTCGCAAAGTGTGTTTTCATTGGAGCGGAAACTGCTGTAGATGGAATATGAACGTTCGCGTCCGTAATTGCGGAAAATTCTACGTCTACGAGTTGCCACCGACACAATATTGTTCTTTGCGGTACTGTGGGAACAAGGATCAAGGGACACCACCACCTCCAGTAACACCACCACCCCCCACTGGTTCCCCACCCATACCAGGTGCATGCGGAGTCCGTCCTCACTCCAGAATTGTAGGTGGTGTCAACGCCAAGCACGGTGATTGGCCATGGCAGGTTCAGCTGCGTACCACTGGTGGTTTCCCATACTGTGGTGGATCACTTGTCGGTCCTGAATGGATTGTTACAGCCACTCATTGCGTCCAAGGAAAATCACCCAGCTCCATTGTCATAAGACTTGGCGCACACCGACGTGTCATTAATGTTGGAAGTGAGCAGGATATTCGAGTTACCAGAGTAATTACACATCCGTCATATCACAAACCGTACAGATACAGCAACGATATCGCTTTACTGAAACTGGAAAGACCAGCTCAGCTGAACAGGTATGTAAACCTGGTTTGTCTTCCCCAATCCGTTCCTGAACCAACTGACGGTACCAGATGCTGGATCACGGGCTGGGGCCGACTTGCTTCTGGGGGTGCTACGCCTGACTATCTTCAGCAAGTTCAGGTTCCAGTGGTCAGTCGTGCTCGCTGTGATAGAGCCTACCCAGGGAAGATCCATGATTCCATGATCTGCGCAGGCCTGGACCAAGGAGGAATAGACTCCTGTCAGGGGGATAGTGGTGGGCCGATGGTGTGTGAGACCGGAGGGAAGTTCTTTCTTCAAGGTGCCACCAGCTGGGGTTATGGATGTGCCAGCCCTGGAAAGTTTGGCGTCTACGCCAAAGTGAAGTACGAGTTGAACTGGCTTAATTCTAATATGTCCTAA

Transcript

rna-Spis5614_mrna

ATGACACGAGCAagggacaaagaaaaagttctgagtccccatgaggaattgaacctcagaccttcagattctGCTCTCGGATGCTCTACCACAGAGCCACAGAGACTATATTCCGAGCAAGCCAACTTGAAACCAAAAACAGGAATAATGCTTCTGAATATGGGAGGTCCAGAGACAACAAATGAGGTTCATGATTTTCTCTTGCGACTTTTTTCTGATCGTGACCTTATGGTTTTACCTGCTCAAAGTAAGATGGCTCAATGGATTGCCAGAAGAAGAACCCCTAAAATCCAGGAACAGTATCAAAAGATAGGTGGTGGCTCTCCTATCAAAATGTGGACTGAAAAACAAGGAGAGGGAATGATAAAACTGCTTGATGACATGTGCCCCGATTCAGCTCCTCACAAGTTTTATATTGGATTCCGTTATGTGAAACCTTTAACAGAGGAAACTTTGGATCAGATGGAAAGTGATGGTATAGAAAGAGCTGTGGCTTTCACTCAATATCCTCAGTATTCCTGTTCCACAACTGGGAGCAGTTTAAATGCAATCTACAGACATTACAAGCAAAGAGGAGAGAAGCCTGGAATCAAATGGAGTGTCATAGACCGGTGGCCAACCCATCCTGGTCTTGTTCAGgCCTTTGCAGAAAACATCCAGGCAGAGTTAGCAAAGTTTCCTGCTGATGTCCAAAACGAAGTGGTTATTCTGTTTTCTGCCCACTCTCTTCCAATGAAGGTTGTCGATAGGGGTGACCCATATCCTCAAGAAGTTGCTGCCACAGTACAAAGGGTGATGGAATCATTGAACTACTCCCATCCATACAGACTTGTTTGGCAATCAAAGGTGGGCCCCATGCCATGGCTTGGACCTCAGACGGAGGATTCAATTAAGGGCCTTgcaaagaagggaaaaaagaatATCCTTTTGGTTCCCATCGCTTTCACCTCTGACCATATTGAGACACTTCATGAGCTGGATATAGAGTATGCAGAAGAGGTTGCTCACGAGGTTGGTATCGAGAATATCCGAAGAGCAGCTTCACTGAATGATAGTCCAACTTTTATCAAGGACAACAACCGTGTGGCTTCACGCCCATCTCTCAGTCACGTGTCATTGGAGGCCAAGATGCGAAGCCTGGAGCTTGGCCTTGGCAGaaatccTGCCAATTACAGAATAGTCGTTGGTGATCACAACCGAAATGCTAACGAGGGAACTGAAGAGTCGGTTGGCGCCAAGCAAATCATTTCTCACCCCGAATACAATCGACCTGGTAGACTCAACAATGACATCGCCCTGATTGAACTCGCTAGGTCTGTGAAACTCTCTGTCAGGGTGAACCCTGTGTGCCTGCCATCTAGCGACTCAGATGTACCTACGGGATCAAAATGCTACATTACAGGCTGGGGAAAGATTAGACATCCTGGAGCTTCTCATCCTATTTTACAGCAAGCCATGATACCGCCTATTGATCCAGCAAAGTGTCGGCAGAAGATTCAAGCAAGTGGAGTTTCAATACAGTTGACTCGGCAAATGTTGTGTGCCGGCGTGGAAAATTCCATTTTAAGTGGTTGCCATGGTGACAGTGGAGGCCCGTATGTCTGCTTGAATGGGGATGGGACATACACCTTGCACGGTGCAGTAAGCTGGGGTTCTTCCAGATGCGATGCTAAACAACTTTTTACTGTGTTTGCCCGGGTGACCCAGTACCGAGCTTGGATCAAACAGCACACTGGGTTAAGTGGAGGAGGAGGTTCACCGCCACCAGTGTCTCCTGAGTGTTCAGGTTACCACGTCCTGAGCGAAAGTGACCGCAACAAAGGCTACAAAGGAGTTGTAAAATGTGACCGGCCGTTGCCCGCTGGAAAACGCTGGTATAGGTTTCAAGGAGAGGCAGGCTCACAGATGCCAACACAGTGTGTGCCTAGATATCAGTGTGGTACCCATGCTCCGGGCTGGCTGAGTGGCGCCCATCCCACAGTGGGCGAGGGAGCCGTTCAGCGCAAAGTGTGTTTCCATTGGTTGTCAAACTGCTGTAATTGGTCCAGTAACATTAGAGTGCGTAACTGTGGCGGTTTCTTTGTGTACGAGTTGGTTGCACCACCCGGATGCAGCATGCGATACTGTGGAGAGAATGTTCAAGGAGGCACGCCACCACCTCCAAGTTCTTCGCCACCTCCAACTGTTTCTGTTTGTTCCAACTACAAAGTCTTGAACGAAAGCGACCGTAACACAGCTTACAAAGGGGTTACCAAATGTGACAGCTCAATTGGAAAAGGCTGGTACAGATTCATGGGAGATGCAGGCACACAGATGCCAACTAAGTGCGTTCCTAAATATCAGTGTGGTACCCATGCACCGGGCTGGCTGAGTGGCGCACATCCCACGGTGGGGGAGGGAACCGTTCAACGCAAAGTGTGTTTCCATTGGTCATCGGGCTGCTGTCAGTGGTCCAGTAATATCCAGGTTCGTAATTGCGGGGGTTTCTTTCTGTACGAGTTGAATCGGCCACCAGCCTGCAGTTTGCGATTTTGTGGAGAGAAACCTCAAGGTTGTGGTTCGTCAACGCCTCCACCTCCTCCATTGCCGACAACGCCGGTTAACGCACCAGAATGTTCCAACTACAAAGTCCTGAATGAAAACGAACGTGCTAAAGGATATCGAGGTGGAATCGTCAAGTGTGACCGCACTGATCGCACTGGTTTTGTGAAGGCCTGGTACAGATTTGAAGGAGGTGCCGGTGACCAAATGCCTGATACCTGTGTACCAGTTAATCGTTGTGGTACGCATGCTCCAGGCTGGCTTAGTGACGGTCACCCCGCAGTGGCTGAAGGGGCTGCCTCTCGCAAAGTGTGTTTTCATTGGAGCGGAAACTGCTGTAGATGGAATATGAACGTTCGCGTCCGTAATTGCGGAAAATTCTACGTCTACGAGTTGCCACCGACACAATATTGTTCTTTGCGGTACTGTGGGAACAAGGATCAAGGGACACCACCACCTCCAGtaaCACCACCACCCCCCACTGGTTCCCCACCCATACCAGGTGCATGCGGAGTCCGTCCTCACTCCAGAATTGTAGGTGGTGTCAACGCCAAGCACGGTGATTGGCCATGGCAGGTTCAGCTGCGTACCACTGGTGGTTTCCCATACTGTGGTGGATCACTTGTCGGTCCTGAATGGATTGTTACAGCCACTCATTGCGTCCAAGGAAAATCACCCAGCTCCATTGTCATAAGACTTGGCGCACACCGACGTGTCATTAATGTTGGAAGTGAGCAGGATATTCGAGTTACCAGAGTAATTACACATCCGTCATATCACAAACCGTACAGATACAGCAACGATATCGCTTTACTGAAACTGGAAAGACCAGCTCAGCTGAACAGGTATGTAAACCTGGTTTGTCTTCCCCAATCCGTTCCTGAACCAACTGACGGTACCAGATGCTGGATCACGGGCTGGGGCCGACTTGCTTCTGGGGGTGCTACGCCTGACTATCTTCAGCAAGTTCAGGTTCCAGTGGTCAGTCGTGCTCGCTGTGATAGAGCCTACCCAGGGAAGATCCATGATTCCATGATCTGCGCAGGCCTGGACCAAGGAGGAATAGACTCCTGTCAGGGGGATAGTGGTGGGCCGATGGTGTGTGAGACCGGAGGGAAGTTCTTTCTTCAAGGTGCCACCAGCTGGGGTTATGGATGTGCCAGCCCTGGAAAGTTTGGCGTCTACGCCAAAGTGAAGTACGAGTTGAACTGGCTTAATTCTAATATGTCCTAAAACTAGTACAAAAGACAACGGCTTCATGAGGGATATTTAAAGCATTAGTAATAGGGGTTAATTGTGGGGAACATTACACACACTGGAAATATCATAGATATCGTTGAATGATGGATCAATAAAAGCAATTGAGAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00762 all species →	Ferrochelatase	Ferrochelatase	Domain	Interproscan
PF00089 all species →	Trypsin	Trypsin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009003 all species →	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR033644 all species →	Domain	Ferrochelatase, C-terminal	Interproscan
IPR001254 all species →	Domain	Serine proteases, trypsin domain	Interproscan
IPR001314 all species →	Family	Peptidase S1A, chymotrypsin family	Interproscan
IPR019772 all species →	Active_site	Ferrochelatase, active site	Interproscan
IPR001015 all species →	Family	Ferrochelatase	Interproscan
IPR033116 all species →	Active_site	Serine proteases, trypsin family, serine active site	Interproscan
IPR050127 all species →	Family	Serine Proteases (Peptidase S1 Family)	Interproscan
IPR033659 all species →	Domain	Ferrochelatase, N-terminal	Interproscan
IPR018114 all species →	Active_site	Serine proteases, trypsin family, histidine active site	Interproscan
IPR043504 all species →	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24264 all species →	TRYPSIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0004325 all species →	Molecular Function	ferrochelatase activity	Interproscan
GO:0006783 all species →	Biological Process	heme biosynthetic process	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX29631.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.