Gene detail

Detailed information of PFX29672.1 in Stylophora pistillata

Genomic Location: Spis.scaffold62:359401...370622
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

AWC38_SpisGene5556

ATGCATATTTCTTGCAGGATGTCAGCTGATGTTCTGCAGAAACCATCTCAAGTGGGTTTTAATTTTCCAAGCTTGAATCAACCAGTCTCTGTTCCTCAGCGGGTGATGGCTGGGCCAGACAGTGGACCAGCTCCTCATAAAATGAACCAACTACAATTTAATCTTGGAGGGCCAACATCTGCTGATCAGTTTACAACAAGGTTTAGAAAACCCCAACCTATCATTATAGAGAAATTAGGTGACCAGAATCGAACAGCACAATTATTATCTCAAAGCAGCACAACTACACCTGTTGTTTATCCTGTTGTGCCTTCAGTGTCCTCCTCTATCACAAGTGACCGACTTGCACTTGCAGTTCATCTGGCCAAGAAAGATGTTAGAAAGGTTAAAGAAATTGGAACTGAGAATGTTTTAGTTTCACAGGAAGAAGAGACAAAGAAAAGGCATTTTGCATCCGCAGGCAAAGATTCGGGTGCTGGAAAAAAGAATAGGGTAAAAGGTATGAAATCTAAATCCCAAGCGGCGATATCGGAAGATAAAACTACCTTACGTGAAAGGGTTCACAGTACTGTGAAGAAACAAGAGGCAGAAGCAAGGAAGCAGTATAAAATGTACTTTTATCCAGCTGCAAGGGAAGATGATGAATATGAATCAGATGGGGAAAGGACACAAGCTAATGAAATCAGAAAACTCCGAAAGGAGCTCCATCAATATATGAAACAAATGGAAAGTTTGAAAGATGAAAGACCACAAATCTTGAAGAACAAAGACAAAAGGTTAAAGAAAAGGAAAGAGGGTGAAGGAAGGCTTGGAGATGAAGATGTAGATGAGCGGCAAGTAGTGAGGGCCGAAGAACAAGCCGCCAGATCAGCAAGGATGCTTTATGTACTTCAGAGACAGGTGTGTGAAATTGAAGATGAGTTAAACAAGAAGAAAAGAGGGATAAAGCATACAAAAAAGAGCCAGACCCTTAGCCGCTTGGCAGCAGCACATAGGGGAGCAGTAAGAGCATTGCAGACATTTGTCAGCCAGGCCCCTCTCCAGCCCAAGGTTGGCCATGGCTTGCCACCAATGTACCAAGAACTGTCTGCCCTCATCAGACAGTTGTCACTTTTGGCAGCGCAGTTGCACATTAATGGGGAAGATTTCTCTGGTGAGGCAAAGAGAGAAAAAGATCACGATGAAAAGGTTCAGTTCCACTCAAAAGATGAGCCTGGCAAAGAAGAGGTTGTGTCAAGAGCAATTTACAAAACTCCAGAAAAAGCCAGTGCATTTATCCAGGAAGTAGCTGACAGAAAGCCTTGGGGAACAATCAAACCAAGATCTCCTCCAAAACAAGTTGTGACAAGTTCTCCTGACCCCACCCCTGAAAGAGATGCTGTTCTGCAAGCCGGGCTTTCTGCACTCCTGAGAGTGAAGGACACTCCAGTTCAGACACCTGTGGTAAAACCAAAGTTTCAACCAAGACCTGCTGTTCAAGTGGAAAAACCAGTCAAACAGGCTTCAAAGAAATCATTGTTGTTACCTGCTAAACTAAAGCTTCAGCGTCAGAAAGCCTTTCAGACAGCCAAAAGAGTTAAACTGCATCATGATGTAGATCAAGCTCACTTTGCCAAAGGAACTGTTGCCTCCATTTTGAAAAAGGCTCCTCCAGTAGTGGGGCATCAGCCAGTGGCCCAAACTAGGACACCACCCAGGGCACCTACATGGGAAGGCCCTCATACTCCTGAGAGAGTGCATTATCAAGGTTTACACAGTCTGTCTCCTAGGTCACACAGAAGGCAATGTGAAACTCAGAAGCTCCAAAGTCCAAGAAGTCCAAAGTATGCTCGCAGAATTCTTCCAACTGACTTGGAGCTGATAGAAAGAGAGGTGGCCAGGCAAAGATGGCTTGACGAAGAGGCAGAACGAAGGATACGTGATTTGGAACGAGAGCGAAGACTTGAGGTTATGCAACGACATCGAAGAAGTCCAGATGTTTTACTTCCAAAGCGATTGATATCTGAGACAGAAGACGCCATTAGATCTCGACTGAAACCGCTACTGGATCGAGCAGAGGCGATAGCGGAGACAGAGGCGAAGAGAGAAGCAGGACAAAAGAAATCGTTACAGCATCAGCTTGGGAAACTTGCCTCGCAGACAACTCTGAACCAAGCTGATGTCTTGGCCGAAAAAGTTCTCGATGACATTTTAGAGGATACAGTTCTTGAAATGCAAAGATTAGAGTTAGAAGATGACGTTCAAAGGCAAGCCGATAATTTACAAAACAGTTCTACCTTAGAAAATATTCTTCAGAGACTTCAGAGTTTCGAGAAAGCCGAAGAGGAAATAAGACAACACTGGGTCCAAGTGAATTATGCAGATGTTGAAAAATCAACTGAAAATCTCCCCACTGGGAAAAGCACTCAACCAGCTAAGGATCCTAAACCAATCATGTTCACCAGGGCTGTGGAAACCGAAAGCCACCGACTGTTACCGGGAAACGCCCGAGCACCTCCCGACGACGATAGACCAGGTGTCAGCGAGCCATTCAGACTGTTGAATGAAATTAGTGCAACCAGTAGCTTTTCCTCCCTAATGGAAGAACGCTCCTTCGCTCAAAGTTCCATTTACAAAAGATCTCAAAATAGCTCAGCCCCACAAAGTCGACCCCTCACTTCTGGCACCCAACCTACAGTGTTCCTAAGTGTGCCAAAGGAAATGAGAGCTAGTATAGTGTCTTATAGGAACCGATTCAACAAATATCTTCAGGACACTTCTACTCACGAAGAAGGAACGTTTGACCCGTGGGGACTGGTAAACAGGATAAGTGAGGAGTTGTTAGAAGAAGCTTTACAAGAAGTTGGTCATGAACTAGACAATGTATGTGATGTCTACGCCGAGGCTTTGTATAACCAGGAATTTGTCTCGGTCAGCTCAGACGCGTGA

Transcript

rna-Spis5556_mrna

ATGCATATTTCTTGCAGGATGTCAGCTGATGTTCTGCAGAAACCATCTCAAGTGGgttttaattttccaagcttGAATCAACCAGTCTCTGTTCCTCAGCGGGTGATGGCTGGGCCAGACAGTGGACCAGCTCCTCATAAAATGAACCAACTACAATTTAATCTTGGAGGGCCAACATCTGCTGATCAGTTTACAACAAGGTTTAGAAAACCCCAACCTATCATTATAGAGAAATTAGGTGACCAGAATCGAACAGCACAATTATTATCTCAAAGCAGCACAACTACACCTGTTGTTTATCCTGTTGTGCCTTCAGTGTCCTCCTCTATCACAAGTGACCGACTTGCACTTGCAGTTCATCTGGCCAAGAAAGATGTTAGAAAGGTTAAAGAAATTGGAACTGAGAATGTTTTAGTTTCACAGGAAGAAGAGACAAAGAAAAGGCATTTTGCATCCGCAGGCAAAGATTCGGGTGCTGGAAAAAAGAATAGGGTAAAAGGTATGAAATCTAAATCCCAAGCGGCGATATCGGAAGATAAAACTACCTTACGTGAAAGGGTTCACAGTACTGTGAAGAAACAAGAGGCAGAAGCAAGGAAGCAGTATAAAATGTACTTTTATCCAGCTGCAAGGGAAGATGATGAATATGAATCAGATGGGGAAAGGACACAAGCTAATGAAATCAGAAAACTCCGAAAGGAGCTCCATCAATATATGAAACAAATGGAAAGTTTGAAAGATGAAAGACCACAAATCTTGAAGAACAAAGACAAAAggttaaagaaaaggaaagagggTGAAGGAAGGCTTGGAGATGAAGATGTAGATGAGCGGCAAGTAGTGAGGGCCGAAGAACAAGCCGCCAGATCAGCAAGGATGCTTTATGTACTTCAGAGACAGGTGTGTGAAATTGAAGATGAGttaaacaagaagaaaagaggGATAAAGCATACAAAAAAGAGCCAGACCCTTAGCCGCTTGGCAGCAGCACATAGGGGAGCAGTAAGAGCATTGCAGACATTTGTCAGCCAGGCCCCTCTCCAGCCCAAGGTTGGCCATGGCTTGCCACCAATGTACCAAGAACTGTCTGCCCTCATCAGACAGTTGTCACTTTTGGCAGCGCAGTTGCACATTAATGGGGAAGATTTCTCTGGTGAggcaaagagagaaaaagatcaCGATGAAAAGGTTCAGTTCCACTCAAAAGATGAGCCTGGCAAAGAAGAGGTTGTGTCAAGAGCAATTTACAAAACTCCAGAAAAAGCCAGTGCATTTATCCAGGAAGTAGCTGACAGAAAGCCTTGGGGAACAATCAAACCAAGATCTCCTCCAAAACAAGTTGTGACAAGTTCTCCTGACCCCACCCCTGAAAGAGATGCTGTTCTGCAAGCCGGGCTTTCTGCACTCCTGAGAGTGAAGGACACTCCAGTTCAGACACCTGTGGTAAAACCAAAGTTTCAACCAAGACCTGCTGTTCAAGTGGAAAAACCAGTCAAACAGGCTTCAAAGAAATCATTGTTGTTACCTGCTAAACTAAAGCTTCAGCGTCAGAAAGCCTTTCAGACAGCCAAAAGAGTTAAACTGCATCATGATGTAGATCAAGCTCACTTTGCCAAAGGAACTGTTGCCTCCATTTTGAAAAAGGCTCCTCCAGTAGTGGGGCATCAGCCAGTGGCCCAAACTAGGACACCACCCAGGGCACCTACATGGGAAGGCCCTCATACTCCTGAGAGAGTGCATTATCAAGGTTTACACAGTCTGTCTCCTAGGTCACACAGAAGGCAATGTGAAACTCAGAAGCTCCAAAGTCCAAGAAGTCCAAAGTATGCTCGCAGAATTCTTCCAACTGACTTGGAGCTGATAGAAAGAGAGGTGGCCAGGCAAAGATGGCTTGACGAAGAGGCAGAACGAAGGATACGTGATTTGGAACGAGAGCGAAGACTTGAGGTTATGCAACGACATCGAAgaagTCCAGATGTTTTACTTCCAAAGCGATTGATATCTGAGACAGAAGACGCCATTAGATCTCGACTGAAACCGCTACTGGATCGAGCAGAGGCGATAGCGGAGACAGAGGCGAAGAGAGAAGCAGGACAAAAGAAATCGTTACAGCATCAGCTTGGGAAACTTGCCTCGCAGACAACTCTGAACCAAGCTGATGTCTTGGCCGAAAAAGTTCTCGATGACATTTTAGAGGATACAGTTCTTGAAATGCAAAGATTAGAGTTAGAAGATGACGTTCAAAGGCAAGCCGATAATTTACAAAACAGTTCTACCTTAGAAAATATTCTTCAGAGACTTCAGAGTTTCGAGAAAGCCGAAGAGGAAATAAGACAACACTGGGTCCAAGTGAATTATGCAGATGttgaaaaatcaactgaaaatctCCCCACTGGGAAAAGCACTCAACCAGCTAAGGATCCTAAACCAATCATGTTCACCAGGGCTGTGGAAACCGAAAGCCACCGACTGTTACCGGGAAACGCCCGAGCACCTCCCGACGACGATAGACCAGGTGTCAGCGAGCCATTCAGACTGTTGAATGAAATTAGTGCAACCAGTAGCTTTTCCTCCCTAATGGAAGAACGCTCCTTCGCTCAAAGTTCCATTTACAAAAGATCTCAAAATAGCTCAGCCCCACAAAGTCGACCCCTCACTTCTGGCACCCAACCTACAGTGTTCCTAAGTGTGCCAAAGGAAATGAGAGCTAGTATAGTGTCTTATAGGAACCGATTCAACAAATATCTTCAGGACACTTCTACTCACGAAGAAGGAACGTTTGACCCGTGGGGACTGGTAAACAGGATAAGTGAGGAGTTGTTAGAAGAAGCTTTACAAGAAGTTGGTCATGAACTAGACAATGTATGTGATGTCTACGCCGAGGCTTTGTATAACCAGGAATTTGTCTCGGTCAGCTCAGACGCGTGATCAATGTCTTCCTTGATATCTAGGACTGTTATTATCGAGCAACAATGCAGCTTATTTAAATCTGACTTCAACTGCGATGGCAACTGTTTATGTAAGGATCGCTGCTATATTATTGGCTCAATAAACTACAAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15718 all species →	MNR	Protein moonraker	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031447 all species →	Family	Protein moonraker	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15732 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007099 all species →	Biological Process	centriole replication	Interproscan
GO:0034451 all species →	Cellular Component	centriolar satellite	Interproscan
GO:0071539 all species →	Biological Process	protein localization to centrosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21765	MNR; protein moonraker	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.