Gene detail

Detailed information of PFX30247.1 in Stylophora pistillata

Genomic Location: Spis.scaffold53:868580...877972
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis4979_mrna

CAATGTCTGAGGAACAGTTACTTAGAGTTTTagtttccttgttaattatTGCCAGTGCAAGATATTTTCGTTTTGTCAATTCAAGTGGAGAAGATAGTATAGTGGCAGATGTTTTCAATGAAACGACAATTAGTCGCATCGCGTTCGGAAGTTGCAGTTTCCCCAAGAAGCCTCAACCATTGTGGAAACATATATCAAGTCAACGACCAGATGTATGGGTTTGGCTGGGAGATGCTGTGTATGCTGATACCAAAGTAGTACCACTTCTGTGGACTCCATCTCCTCTTGGTGAAAtggttgaaaaatttaattacttAAAGTTCTCGTCAGAATATCAGGAATTCCTCCGAAGTGGCATTAAGGTTTTGGGTGTGTGGGATGACCATGACTATGGAATGAACAATGGAGGAAAGCATTATAAAGATCGGCTTCAAGCCCAAGGTGTTTATTTAGATTTTCTGGATGAACCCTCAGAGAGCATACGACGCAGGCGAGAAGGCACTTATGTTTCATACAGCTTTGGTAGCGGCAGTAGAAGAGTTAAGctTATTCTACTTGACACTCGTTCGCATCTTAAATGGGGCCCAGAGTGTGATATATTAGGAGCAGAGCAGTGGTCATGGTTGGAGATGCAACTTAGTGATCCAAATCCAGTTGCACTTAGTATCATTGGCAGTGGAATACAGGTGATTTCAGACGTTCCCTATACGGACAGATGGACTGGTTGCCCCTCAAGCTATGATCGTTTAATTTGGCTCGTACAAAGGAATCCACGGGTGATTCTTATCAGTGGAGATGTCCATTTTGGGGAATTTTCTTGTCTCAATAGCACCAGCACGGGATATCCTCTTTATGAGGTAACTTCTAGCGGACTCACTGCCACGTGTGTATCTTGGATGTCAAAAGCCACGTGCCGCTGGCTTCTAGAGAACGTTTTAACATCCTCGAAACGTACTCATCCGTTTATAACTGAACTAAATTACGGTTTGATTACTATTCACTGGAACGATCAACCAATCTCCATTGCAGTAGAAGTACGTGGAGAAACTGGAAGTTATCTCAAGCAAACTATATCTTTAGCTCATTTAGAGAAGGCAAGAGATGCTAACCGATGTCCACAGAAATTAGAAGATCCTCCAGTtatcaagaaaaatttattttacgcAGCAGCTATTTGCGTACTTACGACTATCTTTGTGGGGCTGCTAAGgctcaTTATCTTCATTCTCAAAATAGTTTTAACCAGGATTGTGTTCCCATTGCTTGGAATATCTCTTCAGTCTTCCCCTAGCTCTAGTTCGAGCTTGCAACgaaccaaacacaaaaacaacaaaatcatcAAATCGGAATAACTGACTTGTGTGGAAATAGGACAAAGTAGGAGAGGAAGGAACTGCTGCAATGGCAAGAGACTGCccacaacttttgaaatttaacCATTTATGACGATATATTTTAACTtataatccatcaaatatttttgttcgcgCGCGATTGGCCTAAACGCATCTCGTGGACGAATAATCCTCAGCTAAAACTGGCGTGGAGGATATACGAGGATATTACCCAATTCAGGATAAGAGGGCGTTTTATGGTTATTACACAAGAGGGGAAACATTTGTTCATAAAGTCGTAACAGAgaacaatcaaaagaaaactcCCCATACTGCAAACAGTAAGTTGTTTAGAACCAAGTTTTCGCGTgcgttgcaaaatatttgaaagataatAAACACAATCGTCTCTATTTTGAGCCAAAATATGCTCGAGCTTCGCTCCGAAAAACTGTCAcatcttggaacagataatTTTCGCTGGCAAGTATTCTTGCATATTTTCACGCTATAGAGAGGGTATTgttagatattttaaaaatgaaaattgtccTTATTTGTAAtgtaagtattttttaaatttaaatcctttctatttaaaactcttttcattgttttattgaCGGAGGATATTTATTGATTGGTTTTTACGTGAAGAGAGCTACGTTCTTCAAAATTGAATTTCGTCTCACCATTTATCAATTCAATGccaatttttctaaaatttttgaaGTTTAGAATTTCTACATCTAAATATTTATATCAATCGAgtaatcaaattttttcttcgTCTCACTGGCTCGTTGCCTGTGACGCAAGACAAACAAAGCGCACTTATAAACCGTTTAACGTCTCAGAGGTGATACTAATTGTCCTTTTTAGATGGTTCAGATAATTTTGTGTTACATGTAGAAAACATCCTCTTTCTTATAAGTTTAGCTGCTTACATAATTATTTCTTGGTGTTTTGAGATCTGCAAAGAAAGTGAGGTTCTGAGTCGTCGTCTCTTTGGTTGCGTGCATGGAATTGTGGGAATTCCACGACACTTGCACGCGCTCCCTGTTCGCTGCACGCCGCCAAGGGAAAAACGAGAAGTGGAAAAATAGACCGAATCCACACGTTTTCAAGCTAATTTAGAAGTTACTTCAAACCTCCTCAAATAAATTGTGTTGGTAATATATCTGTGGTCCCAGTTAATGACTGT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09423 all species →	PhoD	PhoD-like phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018946 all species →	Domain	PhoD-like phosphatase, metallophosphatase domain	Interproscan
IPR029052 all species →	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR038607 all species →	Homologous_superfamily	PhoD-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33987 all species →	CALCINEURIN-LIKE METALLO-PHOSPHOESTERASE SUPERFAMILY PROTEIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for PFX30247.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX30247.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.