Genomic Location: Spis.scaffold39:387200...484704
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families
| CDS |
| Vps13c |
| Transcript |
| rna-Spis3984_mrna |
| Protein |
| PFX31201.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16910 all species → | VPS13_mid_rpt | VPS13, central RBG modules | Repeat | Interproscan |
| PF12624 all species → | Chorein_N | VPS13-like, N-terminal | Domain | Interproscan |
| PF16908 all species → | VPS13_ext_chorein | Vacuolar sorting-associated protein 13, extended-chorein | Repeat | Interproscan |
| PF01094 all species → | ANF_receptor | Receptor family ligand binding region | Family | Interproscan |
| PF16909 all species → | VPS13_DH-like | Vacuolar-sorting-associated 13 protein, DH-like domain | Family | Interproscan |
| PF00003 all species → | 7tm_3 | 7 transmembrane sweet-taste receptor of 3 GCPR | Domain | Interproscan |
| PF21679 all species → | VPS13_C | Intermembrane lipid transfer protein VPS13, C-terminal | Domain | Interproscan |
| PF09333 all species → | ATG2-VPS13_C | ATG2/VPS13, C terminal domain | Domain | Interproscan |
| PF06650 all species → | VPS13_VAB | Vacuolar-sorting associated protein 13, adaptor binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR031642 all species → | Domain | VPS13, middle RBG modules | Interproscan |
| IPR026854 all species → | Domain | Vacuolar protein sorting-associated protein 13-like, N-terminal domain | Interproscan |
| IPR031646 all species → | Domain | Vacuolar protein sorting-associated protein 13, extended chorein | Interproscan |
| IPR001828 all species → | Domain | Receptor, ligand binding region | Interproscan |
| IPR031645 all species → | Domain | Vacuolar protein sorting-associated protein 13, DH-like domain | Interproscan |
| IPR017978 all species → | Domain | GPCR family 3, C-terminal | Interproscan |
| IPR049424 all species → | Domain | Intermembrane lipid transfer protein VPS13, C-terminal | Interproscan |
| IPR015412 all species → | Domain | Atg2/VPS13, C-terminal | Interproscan |
| IPR028082 all species → | Homologous_superfamily | Periplasmic binding protein-like I | Interproscan |
| IPR026847 all species → | Family | Vacuolar protein sorting-associated protein 13 | Interproscan |
| IPR009543 all species → | Domain | Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16166 all species → | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004930 all species → | Molecular Function | G protein-coupled receptor activity | Interproscan |
| GO:0007186 all species → | Biological Process | G protein-coupled receptor signaling pathway | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0006623 all species → | Biological Process | protein targeting to vacuole | Interproscan |
| GO:0019898 all species → | Cellular Component | extrinsic component of membrane | Interproscan |
| GO:0045053 all species → | Biological Process | protein retention in Golgi apparatus | Interproscan |
PFX31201.1.
