Gene detail

Detailed information of PFX31245.1 in Stylophora pistillata

Genomic Location: Spis.scaffold38:1004160...1011970
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

WWC2

ATGGAAGCAGTTTCTGGAGAAGTACAGGCGCGAGAAGAGGGCTATGAAACGTTGAAGAAAATTGATAGGAAGTTGTCTTCCCGTCAAGGTTGCAAGAAGGAGGACGTACAGGGTTTACTGGAGGAAGTAACAAGTACAGAACGAATATTGTCTTCAAAGGAGCAAGAAAGAAATGAAATTATTGAGGCATTGTTGAGACTCAAAGATAAACTTTCACAGCCTGAATCTGCGAACATGGGCAAAGATGATTCAGCTGGAGTGGGAATGAGTGTTGGATCCCAATTGGACTTTGGCTCAGAATCGGCCGTTGAACATCTCCCCGTGCGGGATAAACAAGAATTAAAGGCAGAATACAAAGAATCTCTGAAAAATGAATCGAAGCTGCAAAGTGAAATTACTTGTTTGGACGAAAGAATTACGCAAGCTATGGCAGACGATAATAATTCGAGGCCAACGCTTCTGCAAGAGAAAGAAACTCTCCTAGATGAAATTAGACGCCTAAAATCTCTTGTCAAAAGCGAGGGAGAAAAGAAAAAGCTGGAGAACGAGAAAGACAAACTGGCTGCTGACCTCAGCCACGCAAGGGAAGTCTCTCATCGAGTCACGGCTGATAGAATTCAACTTCAAGCTGAGAAATCAATGTTAGTTCGACAGCTTGCCGAGCAATCCAAGATAACAAACCTTCTCAACATGCGGCTTAGAAATATTTCTGGAAGTACTCCCTCCGTCTCTTCGTGTTCAAGCCGCGGTTCCCTTTCCTTGTCCGGAAGCAGAGGATCTTTATCCGCCTCCAGCCGAGGCTCCCTGAACTCGCTCAACTATCCCGATCTGAATCATAGCGGCGACGCGCCTAACCTCCGAGAGCTCCATCAACGTGTGACGGACTTGCTTCAAGGGATTTCGCCTCACCCTGCGTGTCAACCGATCTACGAAGTGCGCACAACGGGTGCAGCCACAAGTTACACGCCGACATCCGGGAGGGCAAATCACCACAGCGCTAGCAACTCGTCGCAGGTCTCGCTATCGTCACGCGACTCGATTTCGTCTACGCAATCGCCGCCGATCTCTCCGAATACAAGCGATCTCTCTCCGACGAATTCACCAGCCACCGTTCGTGTCATAGCCACAGAGGGAGAGAGTACATGTCTAGATGGGACAGAGCTTGACAGGAGCTGTTTTCCCCAGGCCGACGGAATTCCAGTTCAGCAGCGACTCCGACTATTAACCGCTGACTCTAAGTCTAACGAATCGATTAACAATTTTCCATTCACGCCCATGTCTCCAATCACGGAAGGTATTCCGTCGCTTCCGCTGAGACGACGCGAGATCCATCTTCCACCAACCGGGACTAGGCCCGTCACCGCAGCTCCTTCTGACGAATCCGTGGCGGCTGATAGCGGAGTCTTTGACGCATCTCAAGAGAACCTAAAAGCTGCTCAAAGAGGGGACTTCGACGAAGACAGTGTGGACACGGCTCAGATGAAACTTGGACTCTCGTATGATGTTGATCGCGAAGTTCTGATCGTGTGTATCGATCAAGCAAAGGGTTTAAAGGCTCTTGGCAACACCACGCAGAGCAAAGTGTTCGCAAAAGCCGTCTTGTTACCGAGTTCGCCTAGTGAAAGCTGCGTTATGGAAACGAAGCGTTGTGATTATCAAGACAATCCTGTGTTTGAGGAACAGTTTCATATTCCGGTCCCTGAGAGTAAACTGTCAAGTAAAACTCTCCAGGTGAACCTACACGTCATACCCAGCTTTCAAACAGAAGATCTTCTGGGTGGCGCACAAATCAGTCTTGCGGATTTCAATAGCCAAGCTCCAGTCAGATTTCGATGGTACAACTTACTGAGCTTTGCGTTCTTCCAGTCGGCAGCTGCAAAGTACCAACATGGCAAGACAAGTACCACGACGCCTGCGATTGGTTTTCTTTCGATGGACAACGTTTGTGAGCCAAAGAGAGGCAATTTACGACCCAACTCATGGTGCGAGGGCTCAACATTAAGTCTGGAGTCAGCGGTTGGATTCGAACGTATCCCTTACAGATCAGTGAGTCAAGAGGTACTTAATCAGGGAGTGGAAAGTCTACCCGTTCGAAAGCGCACCGCTGGAAGGCCGGTAGAAAGAGCGCAGTCTCAAGGCGATAGTGTCATCAGCGGAGGCTCTCTACAGGATAGAGACAGCGACTTCGATAGATCGCCTGTAGCTCGCCCCAGACCCCACATGATGAAGTCGAATTATTCGCGAAAGTTTTCTGATCCTCAACCGCTGTCGTTTCCAAGCCACGGGGAATGCGACGAGCTTCATGGGATGTCTTTGAGTCGGCTGGTTTGCGACATAAATCTCAATCGCAGTAACTCGGACTGTACCGCGCGGAAAACGGAAGGTAGTCCGTTTGTGAGAATGTCTGTGGAAAGAACCAGCATGAGACGGAAAAAGCGTCCAATGTCATGGCAAGGAATACAGCAGTACCAACAGTTTAATCATCTTGATACACGAACGGCTGTCGATCTTGAGTTTCAGCTGGAGGTTTCTAAAGCTAAACAGCTGCAGGTAAACGATGACATTCGAAGATTGTCACAGCTGAAAAGACGAATAGAGGAGGCAATTGACGGGGGATGCACTGAAATTCCAAAGTCGCTGGAGGAGAACGAAGAATTTCAAGCTCTACTCAGAGATGTAGATGCCTTCAAAAGCCTTACCGTGCCTGGACATCGAGGTAGAAGCCCTTACTCGAGAAGAAGCCACAAGGCTTTAAGGGATAGAGTTAGCCCTTTGCATAACAAACAAATCAAGTCGCCTGGGAATCCAAATGCTAATGACACTCACTGGGTATGA

Transcript

rna-Spis3948_mrna

ATGGAAGCAGTTTCTGGAGAAGTACAGGCGCGAGAAGAGGGCTATGAAACGTTGAAGAAAATTGATAGGAAGTTGTCTTCCCGTCAAGGTTGCAAGAAGGAGGACGTACAGGGTTTACTGGAGGAAGTAACAAGTACAGAACGAATATTGTCTTCAAAGGagcaagaaagaaatgaaattattgaGGCATTGTTGAGACTCAAAGATAAACTTTCACAGCCTGAATCTGCGAACATGGGCAAAGATGATTCAGCTGGAGTGGGAATGAGTGTTGGATCCCAATTGGACTTTGGCTCAGAATCGGCCGTTGAACATCTCCCCGTGCGGGATAAACAAGAATTAAAGGCAGAATACAAAGAATCTCTGAAAAATGAATCGAAGCTGCAAAGTGAAATTACTTGTTTGGACGAAAGAATTACGCAAGCTATGGCAGACGATAATAATTCGAGGCCAACGCTTCTGCAAGAGAAAGAAACTCTCCTAGATGAAATTAGACGCCTAAAATCTCTTGTCAAAAGCGAGGGAGAAAAGaaaaagCTGGAGAACGAGAAAGACAAACTGGCTGCTGACCTCAGCCACGCAAGGGAAGTCTCTCATCGAGTCACGGCTGATAGAATTCAACTTCAAGCTGAGAAATCAATGTTAGTTCGACAGCTTGCCGAGCAATCCAAGATAACAAACCTTCTCAACATGCGGCTTAGAAATATTTCTGGAAGTACTCCCTCCGTCTCTTCGTGTTCAAGCCGCGGTTCCCTTTCCTTGTCCGGAAGCAGAGGATCTTTATCCGCCTCCAGCCGAGGCTCCCTGAACTCGCTCAACTATCCCGATCTGAATCATAGCGGCGACGCGCCTAACCTCCGAGAGCTCCATCAACGTGTGACGGACTTGCTTCAAGGGATTTCGCCTCACCCTGCGTGTCAACCGATCTACGAAGTGCGCACAACGGGTGCAGCCACAAGTTACACGCCGACATCCGGGAGGGCAAATCACCACAGCGCTAGCAACTCGTCGCAGGTCTCGCTATCGTCACGCGACTCGATTTCGTCTACGCAATCGCCGCCGATCTCTCCGAATACAAGCGATCTCTCTCCGACGAATTCACCAGCCACCGTTCGTGTCATAGCCACAGAGGGAGAGAGTACATGTCTAGATGGGACAGAGCTTGACAGGAGCTGTTTTCCCCAGGCCGACGGAATTCCAGTTCAGCAGCGACTCCGACTATTAACCGCTGACTCTAAGTCTAACGAATCGATTAACAATTTTCCATTCACGCCCATGTCTCCAATCACGGAAGGTATTCCGTCGCTTCCGCTGAGACGACGCGAGATCCATCTTCCACCAACCGGGACTAGGCCCGTCACCGCAGCTCCTTCTGACGAATCCGTGGCGGCTGATAGCGGAGTCTTTGACGCATCTCAAGAGAACCTAAAAGCTGCTCAAAGAGGGGACTTCGACGAAGACAGTGTGGACACGGCTCAGATGAAACTTGGACTCTCGTATGATGTTGATCGCGAAGTTCTGATCGTGTGTATCGATCAAGCAAAGGGTTTAAAGGCTCTTGGCAACACCACGCAGAGCAAAGTGTTCGCAAAAGCCGTCTTGTTACCGAGTTCGCCTAGTGAAAGCTGCGTTATGGAAACGAAGCGTTGTGATTATCAAGACAATCCTGTGTTTGAGGAACAGTTTCATATTCCGGTCCCTGAGAGTAAACTGTCAAGTAAAACTCTCCAGGTGAACCTACACGTCATACCCAGCTTTCAAACAGAAGATCTTCTGGGTGGCGCACAAATCAGTCTTGCGGATTTCAATAGCCAAGCTCCAGTCAGATTTCGATGGTACAACTTACTGAGCTTTGCGTTCTTCCAGTCGGCAGCTGCAAAGTACCAACATGGCAAGACAAGTACCACGACGCCTGCGATTGGTTTTCTTTCGATGGACAACGTTTGTGAGCCAAAGAGAGGCAATTTACGACCCAACTCATGGTGCGAGGGCTCAACATTAAGTCTGGAGTCAGCGGTTGGATTCGAACGTATCCCTTACAGATCAGTGAGTCAAGAGGTACTTAATCAGGGAGTGGAAAGTCTACCCGTTCGAAAGCGCACCGCTGGAAGGCCGGTAGAAAGAGCGCAGTCTCAAGGCGATAGTGTCATCAGCGGAGGCTCTCTACAGGATAGAGACAGCGACTTCGATAGATCGCCTGTAGCTCGCCCCAGACCCCACATGATGAAGTCGAATTATTCGCGAAAGTTTTCTGATCCTCAACCGCTGTCGTTTCCAAGCCACggggaaTGCGACGAGCTTCATGGGATGTCTTTGAGTCGGCTGGTTTGCGACATAAATCTCAATCGCAGTAACTCGGACTGTACCGCGCGGAAAACGGAAGGTAGTCCGTTTGTGAGAATGTCTGTGGAAAGAACCAGCATGAGACGGAAAAAGCGTCCAATGTCATGGCAAGGAATACAGCAGTACCAACAGTTTAATCATCTTGATACACGAACGGCTGTCGATCTTGAGTTTCAGCTGGAGGTTTCTAAAGCTAAACAGCTGCAGGTAAACGATGACATTCGAAGATTGTCACAGCTGAAAAGACGAATAGAGGAGGCAATTGACGGGGGATGCACTGAAATTCCAAAGTCGCTGGAGGAGAACGAAGAATTTCAAGCTCTACTCAGAGATGTAGATGCCTTCAAAAGCCTTACCGTGCCTGGACATCGAGGTAGAAGCCCTTACTCGAGAAGAAGCCACAAGGCTTTAAGGGATAGAGTTAGCCCTTTGCATAACAAACAAATCAAGTCGCCTGGGAATCCAAATGCTAATGACACTCACTGGGTATGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168 all species →	C2	C2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR051105 all species →	Family	WWC/KIBRA Hippo Pathway Regulators	Interproscan
IPR037771 all species →	Domain	WWC, C2 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14791 all species →	BOMB/KIRA PROTEINS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0019900 all species →	Molecular Function	kinase binding	Interproscan
GO:0035330 all species →	Biological Process	regulation of hippo signaling	Interproscan
GO:0046621 all species →	Biological Process	negative regulation of organ growth	Interproscan
GO:0060090 all species →	Molecular Function	molecular adaptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX31245.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.