Detailed information of PFX31288.1 in Stylophora pistillata

Genomic Location: Spis.scaffold38:148556...160311
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01139
all species →		RtcBtRNA-splicing ligase RtcBFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001233
all species →		FamilyRNA-splicing ligase, RtcBInterproscan
IPR036025
all species →		Homologous_superfamilytRNA-splicing ligase RtcB-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11118
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000971
all species →		Biological Processobsolete tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphateInterproscan
GO:0003972
all species →		Molecular FunctionRNA ligase (ATP) activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0008452
all species →		Molecular FunctionRNA ligase activityInterproscan
GO:0072669
all species →		Cellular ComponenttRNA-splicing ligase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PFX31288.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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