Detailed information of PFX32753.1 in Stylophora pistillata

Genomic Location: Spis.scaffold19:451412...466528
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02732
all species →
ERCC4ERCC4 domainDomainInterproscan
PF04851
all species →
ResIIIType III restriction enzyme, res subunitFamilyInterproscan
PF00271
all species →
Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF16783
all species →
FANCM-MHF_bdFANCM to MHF binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010994
all species →
Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR006166
all species →
DomainERCC4 domainInterproscan
IPR014001
all species →
DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001650
all species →
DomainHelicase, C-terminal domain-likeInterproscan
IPR006935
all species →
DomainHelicase/UvrB, N-terminalInterproscan
IPR031879
all species →
DomainFanconi anemia group M protein, MHF binding domainInterproscan
IPR047418
all species →
DomainFanconi anemia group M protein, XPF-like nuclease domainInterproscan
IPR044749
all species →
DomainFANCM, DEAH-box helicase domainInterproscan
IPR039686
all species →
DomainFANCM/Mph1-like, insert domainInterproscan
IPR011335
all species →
Homologous_superfamilyRestriction endonuclease type II-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14025
all species →
FANCONI ANEMIA GROUP M FANCM FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0004518
all species →
Molecular Functionnuclease activityInterproscan
GO:0000400
all species →
Molecular Functionfour-way junction DNA bindingInterproscan
GO:0009378
all species →
Molecular Functionfour-way junction helicase activityInterproscan
GO:0036297
all species →
Biological Processinterstrand cross-link repairInterproscan
GO:0043138
all species →
Molecular Function3'-5' DNA helicase activityInterproscan
GO:0045003
all species →
Biological Processdouble-strand break repair via synthesis-dependent strand annealingInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0016787
all species →
Molecular Functionhydrolase activityInterproscan
GO:0006281
all species →
Biological ProcessDNA repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10896FANCM; fanconi anemia group M protein-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP