Gene detail

Detailed information of PFX32935.1 in Stylophora pistillata

Genomic Location: Spis.scaffold17:311132...339426
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

MORC2

ATGACAAGTGGTGGAAATTATTCATCGCTCCGCCGGGCTCAACTCACTTACGATTATCTGCATACAAACAGCACAACACACGAATTCCTGTTCGGAGCTTTGGCCGAGTTGGTTGATAACGCAAGAGATGCGTCGTCACAGAAGATCGACATTTACACAGAACCTTGCGAATCATGTCGAGGAAATTTTATATTATGTTTCCGCGACGACGGAGACGGAATGGATCCAAGCGAAGTTGGAAATGTGATACAATTTGGTCGTTCCGTTAAACGTACCGTAGACTCTAGAATGATTGGGCAATATGGAAATGGACTGAAGTCGGGAACCATGCGAATAGGGAAAGACATGATCCTCTTTACAAAGAAAGGTAACACCATGAGCTGCCTGTTCCTTTCAAGGACATTCCACGAGAAAGAGAAGATTGAAGAAGTTGTGGTTCCCATGCCTTCTTGGGAAGTATCCAGCAAGAAACCTTTTGGCAAATCCAAACGTGAATTGGAAAAGCATCAACTTGAATTGGACTTGATCTTGAAGTTCTCGCCATTCAAGATGGAATCACAGTTGTTTGAACAATTTAATAAAATAGGATCGAAAGGGACGCTAGTGGTTGTTTATAATGTAAAACTCATGGACAATGGCGAGCCTGAACTTGATGTAGTCAGTGATCCTTCTGATATCAAAATGGCGGATCCAGAGGCTGGAGGAAACGTGGCAGATTACGACTTGACCATGCCTGAGAGGATTTCTTTTAGAGCCTACACTGCCATTATGTACTTGGATCCTCGAATGAAAATCTACATACAGGGTAAAAAGGTGCGAACGAAAAGACTAACGACTTGCTTATACAACACGAAGTGTTACGATTTCACCTCGAAAAGGTTCAAGACAAGATCAGAGCAAGAAAGTGAGAAGGCTGTACGCGAGGCTAAAATAGCTGAGGAGAAGGCGCGAGAGCTTGAAACACAAGCAAGGGAACTTCAGAAGCAGGCGGAACAAACATCCAAAGATAAAAGGGCGGAGCTGAGAAAGGCACAAGGGCTCGCTACCGCTGCCAGGGCAGATGCACAAATGAAGACTAACATTGCTGAAGCTAAAAAGAAATCCATGAAGGAACCCAAGACTCTTAACTTCACATTCGGATTCAATATTGAAAATCGTCGTTATTACGGAATGTTCATTTACAACTGCAGTCGGTTGATAAAAATGTACGAAAAAGTTGGTCCGCAAAAGGATGGAGGGGTAAAATGTTACGGAATCATAGGTGTTGTAGATGTGCCGTATCTCGTTTTGGAGCCTACACACAATAAGCAGGATTTCGCAGATGGAAAGGAATTTAAACAATTACAAAGAGCGTTGGGTGAGCACTTAGAACAATACTGGAAAGACTCGAAAATTGAAAGTCAGGGTGTCACGAAGTTCTGGGAGGATTTCGGCTATATAGGCAAATGGACGGACGGCCCCTCCATGGATCAGAAGTTTGCGAGAAAAAGGGCGATGCAGATACCCTTTAATGTACAGTGCGACATATGCCTTAAATGGCGAAAACTGCCGTTTGCTCAGAAAAATGTAGGTCGTCAATTGCCCGACGAATGGTGTTGTGCCATGCACCCCGAAACAGATTTTAACAGCTGTGACCGTCCTGAGCAGGTCGTTCCAATTAAGAAAGGAACTTTACAGAAACAAACTAAATCGGCCGAAGAGAAAGCAAGAGAACTGCAAGACGAAATCCGGAAAAAGAAAGAAAAACTCTCTCAAGTTGAGCGTCAAAGACCACAAGTCGCGCAGGCCACGACACAGAAAAGGGTCGAGAGAGTATCTTCGGCGGAGAGTTCCTCTTCATCCACAAGCGACACTTCAGAGTTATATATTCAGAGACGAGTACAGAAGAGGCCAGTCGCAGAAAGTACGGAGATTACGAGAACAAAGTCTACGAAGGAGCCATTGAAACGGCGAAATACAACATCCCCGATTACAGTTGAGGCCAAACGGAAAAAGAATGACGCAGAAGCAACGAAGACTTTGGTCAAAAAGGAACATCAGGAACAAAGAGAACAGCAAATAAAGAGACGAGAGGAACAGAGGAAAGAGGAGCAACGGAAAAAAGAAGCAGCAGAAAAACGGTTAAAAGAAGGGAAAGAAGAACAAAAGAAAAAAGAACTGGAACACCAACGACAACTACAACTACAACGAAAGCGGGACGAAAAAGAACGACAGCGGAAACAAGATGAACTTGAGCAAGAAAACAAAGAAGAAGAAAAACAGGAACAAACACTAAATAAAGACGAGAAAGAACAGGAACAACTCGAGATGGAGCAACTCATGGAGTGGAGTAGCGAGGGAGAATATGATGCAACGATACTCGCAAAGGGAACTAAAGTAGAAGCGAGGGTTGATAACTCAAACTGGTACATTGGAACTGTGTTTGCTTCAAAACCGAAAAAAGGATTTGCTTGCCGAGTTCGCGTCAAATTTGATATGTACCCAAAGGACAAGTATGACAAGTGGTTTGACCATCCTAGTGAAGACTTGAGAGTTCTAAAACCTGTGGAAGAATCGGCTCCCAAGTCTCCTAGCCCAAGCAGAGAAGTGTCGAGCTCAACAATTGAAACGCCAAGCAGTAGGCAGGAGCAGGATCCAAAACCACAGCAGCCGCCAGCTCGGCAAGTAAAGGAGCCCGTACAATCCCCAGAGGACAACCGTGTGTCGTCAATGTCGGATGACACTCCCACAGCAGACCAGGAGCATCCTGCATTAAAAGACGTCGTAGGCTTGTTCAGACGCTGTCTTTGCTACTTTGCTCCTCCGTCGTTTCAAATTTCAAAGGAGGACATCAAAGAGATGGGTACTGAAGAGCTGAGAGAATTTCCACTGGACAACTTTATTGATCATTACGAAAAAGGAATTTCGGAGTTGATCGAAGGTTTTCGGAAAAAAGAGGAAGAAGCCGTCCAAAGAGCCACAAATGCCGAGCAGCGTTTCAGGGAAGCAAACATCGAAAGAGAAAGATCGACAACCAAACTGATAAACCTGAGAAAAAACGCAGGGAAACTGCTTCGCTTTATACAAGAGGATCCCAATGACTGCGCACTGAGCGAGGATGATGTCTCAGACAAAGTGGATGAAATGATGGAGAACATAGCACAGCAGGCGGAGGACCGATAA

Transcript

rna-Spis2176_mrna

CCTCCACCATGCTATTTTACCGTGAGCTTGTTAACGAGTAGTATTGTTCCGGCGCGCATCTATTCAAGACCAGTACgatcaaatttgttttgaattacACAGAGACGGAGTGGTCAGTGGATGGGACCCATTGAGCGTTAATCAGGCTGAGGAGACTAACATTTCAGGGACGCAAAGACTAACACAGTGATCGCGGTCGAAAGCGACGAAATGACAAGTGGTGGAAATTATTCATCGCTCCGCCGGGCTCAACTCACTTACGATTATCTGCATACAAACAGCACAACACACGAATTCCTGTTCGGAGCTTTGGCCGAGTTGGTTGATAACGCAAGaGATGCGTCGTCACAGAAGATCGACATTTACACAGAACCTTGCGAATCATGTCGAGGAAATTTTATATTATGTTTCCGCGACGACGGAGACGGAATGGATCCAAGCGAAGTTGGAAATGTGATACAATTTGGTCGTTCCGTTAAACGTACCGTAGACTCTAGAATGATTGGGCAATATGGAAATGGACTGAAGTCGGGAACCATGCGAATAGGGAAAGACATGATCCTCTTTACAAAGAAaGGTAACACCATGAGCTGCCTGTTCCTTTCAAGGACATTCCACGAGAAAGAGAAGATTGAAGAAGTTGTGGTTCCCATGCCTTCTTGGGAAGTATCCAGCAAGAAACCTTTTGGCAAATCCAAACGTGAATTGGAAAAGCATCAACTTGAATTGGACTTGATCTTGAAGTTCTCGCCATTCAAGATGGAATCACAGTTGTTTGAACAATTTAATAAAATAGGATCGAAAGGGACGCTAGTGGTTGTTTATAATGTAAAACTCATGGACAATGGCGAGCCTGAACTTGATGTAGTCAGTGATCCTTCTGatatcaaaatggcggatcCAGAGGCTGGAGGAAACGTGGCAGATTACGACTTGACCATGCCTGAGAGGATTTCTTTTAGAGCCTACACTGCCATTATGTACTTGGATCCTCGAATGAAAATCTACATACAGGGTAAAAAGGTGCGAACGAAAAGACTAACGACTTGCTTATACAACACGAAGTGTTACGATTTCACCTCGAAAAGGTTCAAGACAAGATCAGAGCAAGAAAGTGAGAAGGCTGTACGCGAGGCTAAAATAGCTGAGGAGAAGGCGCGAGAGCTTGAAACACAAGCAAGGGAACTTCAGAAGCAGGCGGAACAAACATCCAAAGATAAAAGGGCGGAGCTGAGAAAGGCACAAGGGCTCGCTACCGCTGCCAGGGCAGATGCACAAATGAAGACTAACATTGCTGAAGCTAAAAAGAAATCCATGAAGGAACCCAAGACTCTTAACTTCACATTCGGATTCAATATTGAAAATCGTCGTTATTACGGAATGTTCATTTACAACTGCAGTCGGTTGATAAAAATGTACGAAAAAGTTGGTCCGCAAAAGGATGGAGGGGTaaaaTGTTACGGAATCATAGGTGTTGTAGATGTGCCGTATCTCGTTTTGGAGCCTACACACAATAAGCAGGATTTCGCAGATGGAAAGGAATTTAAACAATTACAAAGAGCGTTGGGTGAGCACTTAGAACAATACTGGAAAGActcgaaaattgaaaGTCAGGGTGTCACGAAGTTCTGGGAGGATTTCGGCTATATAGGCAAATGGACGGACGGCCCCTCCATGGATCAGAAGTTTGCGAGAAAAAGGGCGATGCAGATACCCTTTAATGTACAGTGCGACATATGCCTTAAATGGCGAAAACTGCCGTTTGCTCAGAAAAATGTAGGTCGTCAATTGCCCGACGAATGGTGTTGTGCCATGCACCCCGAAACAGATTTTAACAGCTGTGACCGTCCTGAGCAGGTCGTTCCAATTAAGAAAGGAACTTTacagaaacaaactaaatcGGCCGAAGAGAAAGCAAGAGAACTGCAAGACGAAATccggaaaaagaaagaaaaactctcTCAAGTTGAGCGTCAAAGACCACAAGTCGCGCAGGCCACGACACAGAAAAGGGTCGAGAGAGTATCTTCGGCGGAGAGTTCCTCTTCATCCACAAGCGACACTTCAGAGTTATATATTCAGAGACGAGTACAGAAGAGGCCAGTCGCAGAAAGTACGGAGATTACGAGAACAAAGTCTACGAAGGAGcCATTGAAACGGCGAAATACAACATCCCCGATTACAGTTGAGGCCAAACGGAAAAAGAATGACGCAGAAGCAACGAAGACTTTGGTCAAAAAGGAACATCAGGAACAAAGAGAACAGCAAATAAAGAGACGAGAGGAACAGAGGAAAGAGGAGCAACGGAAAAAAGAAGCAGCAGAAAAACGgttaaaagaagggaaagaagaacaaaagaaaaaagaactggAACACCAACGACAACTACAACTACAACGAAAGCGGGACGAAAAAGAACGACAGCGGAAACAAGATGAACTTgagcaagaaaacaaagaagaagaaaaacaggaacaaaCACTAAATAAAGACGAGAAAGAACAGGAACAACTCGAGATGGAGCAACTCATGGAGTGGAGTAGCGAGGGAGAATATGATGCAACGATACtcGCAAAGGGAACTAAAGTAGAAGCGAGGGTTGATAACTCAAACTGGTACATTGGAACTGTGTTTGcttcaaaaccgaaaaaaggaTTTGCTTGCCGAGTTCGCGTCAAATTTGATATGTACCCAAAGGACAAGTATGACAAGTGGTTTGACCATCCTAGTGAAGACTTGAGAGTTCTAAAACCTGTGGAAGAATCGGCTCCCAAGTCTCCTAGCCCAAGCAGAGAAGTGTCGAGCTCAACAATTGAAACGCCAAGCAGTAGGCAGGAGCAGGATCCAAAACCACAGCAGCCGCCAGCTCGGCAAGTAAAGGAGCCCGTACAATCCCCAGAGGACAACCGTGTGTCGTCAATGTCGGATGACACTCCCACAGCAGACCAGGAGCATCCTGCATTAAAAGACGTCGTAGGCTTGTTCAGACGCTGTCTTTGCTACTTTGCTCCTCCGTCgtttcaaatttcaaaggaGGACATCAAAGAGATGGGTACTGAAGAGCTGAGAGAATTTCCACTGGACAACTTTATTGATCATTACGAAAAAGGAATTTCGGAGTTGATCGAAGGTTTTcggaaaaaagaggaagaagcCGTCCAAAGAGCCACAAATGCCGAGCAGCGTTTCAGGGAAGCAAACATCGAAAGAGAAAGATCGACAACCAAACTGATAAACCTGAGAAAAAACGCAGGGAAACTGCTTCGCTTTATACAAGAGGATCCCAATGACTGCGCACTGAGCGAGGATGATGTCTCAGACAAAGTGGATGAAATGATGGAGAACATAGCACAGCAGGCGGAGGACCGATAACAgctgcggttttttttttcttttagctcgATTCGTGGAATCTTTACATGCCATTCGTGTTCTTTCAACTTCATCTTACATCATATTTACAAGCCTTGCGATGAATTAAGATCTGATGTGCTcaattttcttctattttttgtACAAGTCAACACGCTTTGGACAATAACACACGTTCGGCTCACTTTTTACTTGAGCTATGTAATACTAGAACTGTATATCTGTTTTTCAGCATCACacatcaaaaactgttttgtattcctttaaaacttgaaatgtaTGCACGCGGTTTTCGTCCATATCCTAACTGACATTCTTAAAGTTTGTTTAGTTATGAATCAGTGTGTTACCCGAGTTACCAAAGAGTTATCACGTTGGGAATTTTTATGCCACGTGTGAAGGAACCAAGCTTGACATTTCGTGGGCCATCAGTTGAGTGCTACTTGCCATCCTACAAGGTGAAGGAGTTGTGCAAGTTGAAAGACTGAATATCAAtaactaaaacacaaaataatgcTGTATTGCTAGGTGAAATATTTGCAGGCAAATAACTAATGACAACAATATCAGGAACAAACACCAGCTCACTATGGGACAGAATGTGTCAGTACACTTAGACGACTCCTTCGCTTGCAGGAGACTCGAAATTTTTATGTCTGTGGTTTTTTCTTGAAAGGAGGCAAGTCAACAGATTTGGCTCAGCAAGTTAATTGACGACATCCACTGTAAATCTCCATAACCTTGAAAACGACTTTAAAAATTGTAGTGTCAATTTTGGAATTGATTGGATCACAAATCATACCTGAAAAAAGTACTCGGACCACAATTCTTGACTTGGTTCCTTTAAACTGATCAAATATATGAAACAGTATGGTATGTAACCTAGAATACTATTTATTGAGTGTTAGCTTTGACAAAAGTTGATCATTGCTTACAACTTCGATACACATATGCCATGgcaaataaatttatattttagtcGGTGGCGcctcttttttaatctttcctGAAAGCTCGATATTTCTCTAGATGGAACGTCGTTGATGTACGTAATACGTAAAACATTTCCTGGATATTTTGGAAACGACTTAGCTGAGATTAACAAGTGATGTTCGTCTGTACAGTGCTGTTATTAACTCCGAAGGTGAAGTGGGATATTAACGGGGGAGAAGAGTGAATTATTGCACGCTAttggagaaagaaagaagaacagGTGTGTTGCAGAGGAAGAGTTGTCCAAACTTTTTCCTTTcccgaagaaaacaaaaagcagcACTGCGGAAGCTTTTTAAAGAACCTTCGCATGATATCAAGAAAGGATCACTTCACCTGGGGAGTgtcgaaaaagaacaacaaaaacaaggtCCGTTGGAGATCCATGCTTGACACCTTATGCTCTCCTATGAAGCggtttttatataaaaattaacTTGCCAATTTTCGTCTTTCTTTGTTCACAGCTTTGAACGAACAACGTCAACATTGTGCAAACACCGTCTACTTTGTTCAAAGAACATCGACTCTTGTACAAACAACGTTAATTTTGTGCAAACAATGTTCACACTTTGTGCAAACAACGTTCACTTTGTGCAAAGAAAGTCCACACTTGCACGAATAGCGCCGATTTTCCCACGAAGATACGAGAAATTATCGATTGACCAGGGTTGTGCCTAAATCTTACTGGCTAGAGGTACGCCCGAGGACCACTAGTGACGAGTTTCCGAGTCGGGCGATTATcagcagagaggcattttgtctgcgcatgcgcgagTGGAATTGGTTTGTCGCTTTCGGTGCCATTTGTAAAGTTTGCGTTTCTGCGAGATTTCAACTGGACGATCgacacctttttgt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07496 all species →	zf-CW	CW-type Zinc Finger	Domain	Interproscan
PF13589 all species →	HATPase_c_3	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan
PF17942 all species →	Morc6_S5	Morc6 ribosomal protein S5 domain 2-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036890 all species →	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR011124 all species →	Domain	Zinc finger, CW-type	Interproscan
IPR041006 all species →	Domain	Morc, S5 domain 2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23337 all species →	ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24135	MORC; MORC family CW-type zinc finger protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.