Gene detail

Detailed information of PFX33134.1 in Stylophora pistillata

Genomic Location: Spis.scaffold15:546122...561410
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis1994_mrna

GATACTGGAAGAGCTATTtaatgagaaaaacatttcGGATGGGATGGAAAGTGGATAAAGAAGCGATTCTGACCGGTAGCTAGAAAATGAGAGTGGAGAATCGAGgaaagtcCTCGGTTTCAATTATCAAATTTACATATTCCTGAGAAGCGCATTTTATACACTTTAAAATGAGATATTGTAGGTGTTATTGCTTTGTAGAAGTTGGCAATCCCTAAGTATCGTACGTGGCGAATGTTGAAGAGGATGGCATACCTCACACACATAAGTGAACGCGAGTTTTCTCAAGATGACATCGCATATCTTGCAAACGAAGCAAGGGACTTTTGTCTTGCGAGAGGAATGGTTTATAAAGACTCTCTTGGTAAACCACAACACATTCCTTTCACACTTTTCCCTTCACCTTTTCCAAAGAACCTTTTTTCTGCTGCGAGGGAAGTTCAAACGGATTTCAACATTCTTGTTCACAAAGCCAGCCAGGACTACCCATTTGCAAAGAACGCTCTGGCCAGCACAATATCTGCTGATCCCTTCACAGCGAAGCTTTTTCACATTTACGAGAAGGTTTGGGAGCAAGGAACAGTTCAGCCAGTTTCACTAGGAATATTCCGATCAGACTACATGATTGACACGACAGGAAAATCACACAGCGAATGCCATAGTCACACCACAACTGATGTCTCTGACGAAAATAGCAATGCACTTTGCATAAAGCAAGTTGAAATCAACACCATAGCGCTCGGTGGGATCGCATTCTCTTGCCTTGTTCCAGAGATGCACAGGTATCTCCTTGAGTTGATAGGACAAAAGAACAAGGTTCCTCTTAATCCAGCCATGGACGAGGCAGCCGATGGTCTCATTAAGGCCTGGGAACTATACGGCTCAGAACGAGCTGTTATTATGTTTGTTATCCAACCTGACGAGATAAACGTTTACGACCAAAGACATCTGGAATATCGTATTCGCGAAAGaaGCAAGGGTGTAAAAGTAATTAGGCAAAGCCTTACTGATGTATTCAGGGACGGAGAAACAGACAATGCTAAATCCCTTTATGTGAATGGAATGGAAATTGCTGTGGCTTACTTCAGAGCAGGCTACACGCCTAAAGACTATCCCACAGAAAGCGAATGGTCAGCTCGTCTAACGATAGAGTTGTCTCGCTCCATTAAATGTCCCACAGTGGCTCATCAATTGAtgggaacaaaaaaaatgcagcaAGTGATGTCTAACCCTGGGGTGCTAGAAAGGTTTTTACCTGACAAGGAATCCGTGGACAGAGTGCGAAGAACTTTCACTGGCCTCTATTCTCTTGACCCGGGACCGTTTGGGGACGAAAATATGGAGTGTTGTCTTAAGAGGACGGAAAGATGTGTTCTTAAGCCTCAACGAGAAGGAGGAGGAAATAACATTTACGGCGAAGATATACGCCACACGCTGATCAACGATGCTAAAAGCAGGACGCAGTACATATTGATGGATCTGATTCAGCCGAAAATCGACAGAAACTTAATAGTCCGTGAAGAATACACAAACGTACAAACTTTGGATGTCATTCCGGAACTTGGGATTGTCGGCATTTTTCTCAGCCGAGGAGATGAAGTCCTTGTCAACAAAGAAGGAGGTTACCTGATCAGGACAAAAGCAGCCACTCAGGGGGATGGTGGAGTGTACGCTGGACGAGCTGCTTTTGATAGCCCATATGTAGTATAGTTCATTTGGACCACGACAGAAGCAAAAGAAAGGTGGTTGTCAGCAAGACTATCATTTCTTGAAGGTGTCGCACTCCTTGTTTTGTGGTGAAGTTAGCTAGAGGAGAAGATCATGCCACTTGCATCGATGTTGTGACGTCATCCGTTTTGACTGAACCGTCGAATGGCATCGTTCGTCATGAAAGACGAGGCTTCTCGCCAGAACATTGAAGTTGTTTTAAAGGGACGTTTGCTGAGCATTAAGTTTACGTAATGAAAACTGTTCTCTTTTCCTAGAATTGTGATTGACTATTCTCGCCTTGTATTACACCGCCGCGTTGGACCATGGGTTCCGTAAAACGTTAATTTAGCTGAAGAATCTTCCATGTAAAAAGACAAACCAGGAAACTTGTAGACAGAATGTGAAGATTGGATTACAAGTCATGTTGCCTCCATAAAGAACAAATCACCCAGTATTGAAATGGACAATTTTAGCATCCAAAACACTTGGTGTCCCTTAAAAACGCATTTTTGACTCACAATTTTATTTATCACACAAAACatcatatttaatttatttctacaGAATTCGACCTTTACGGCTTAACCAATACCCCAAAACACAGGTCTTTAAATTACTAACAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03917 all species →	GSH_synth_ATP	Eukaryotic glutathione synthase, ATP binding domain	Domain	Interproscan
PF03199 all species →	GSH_synthase	Eukaryotic glutathione synthase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005615 all species →	Family	Glutathione synthase	Interproscan
IPR016185 all species →	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR037013 all species →	Homologous_superfamily	Glutathione synthase, substrate-binding domain superfamily	Interproscan
IPR014709 all species →	Homologous_superfamily	Glutathione synthase, C-terminal, eukaryotic	Interproscan
IPR014049 all species →	Homologous_superfamily	Glutathione synthase, N-terminal, eukaryotic	Interproscan
IPR014042 all species →	Homologous_superfamily	Glutathione synthase, alpha-helical	Interproscan
IPR004887 all species →	Domain	Glutathione synthase, substrate-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11130 all species →	GLUTATHIONE SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004363 all species →	Molecular Function	glutathione synthase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006750 all species →	Biological Process	glutathione biosynthetic process	Interproscan
GO:0043295 all species →	Molecular Function	glutathione binding	Interproscan
GO:0016874 all species →	Molecular Function	ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21456	GSS; glutathione synthase	EC:6.3.2.3	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.