Genomic Location: Spis.scaffold13:597066...668957
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families
| CDS |
| UBR4 |
| Transcript |
| rna-Spis1797_mrna |
| Protein |
| PFX33291.1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | E3|E3 activity|UBR-box · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00052 all species → | Laminin_B | Laminin B (Domain IV) | Domain | Interproscan |
| PF19423 all species → | E3_UBR4_N | E3 ubiquitin-protein ligase UBR4 N-terminal | Domain | Interproscan |
| PF00053 all species → | Laminin_EGF | Laminin EGF domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002049 all species → | Domain | Laminin-type EGF domain | Interproscan |
| IPR000034 all species → | Domain | Laminin IV | Interproscan |
| IPR016024 all species → | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR045841 all species → | Domain | E3 ubiquitin-protein ligase UBR4, N-terminal | Interproscan |
| IPR003126 all species → | Domain | Zinc finger, UBR-type | Interproscan |
| IPR045189 all species → | Family | E3 ubiquitin ligase UBR4-like | Interproscan |
| IPR000742 all species → | Domain | EGF-like domain | Interproscan |
| IPR047509 all species → | Domain | E3 ubiquitin-protein ligase UBR4-like, UBR-box | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21725 all species → | E3 UBIQUITIN-PROTEIN LIGASE UBR4 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10691 | UBR4, ZUBR1; E3 ubiquitin-protein ligase UBR4 | EC:2.3.2.27 | Ubiquitin system | ko04121 | deepkoala |
