Gene detail

Detailed information of PFX33657.1 in Stylophora pistillata

Genomic Location: Spis.scaffold10:986434...1002112
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

CEP63

ATGCGAGGAAGAACTCCGAGAGAGATGCCTTCAAAGACACTACAGTTAATGCGGCAAATTGATCTTATGGTATCTGCCAAGAAAGCAGAATGGGAAACTCATGTGCATTCTGTTCAAATACAATTGGACAAGAAAACCAAAGAGCTGGAATTTGTTAAAGTTCAACTGGAGCAGAAGTGTCAGGAGGTTGGTGGGCTTGAACAGAAAGTGGATGAAATGGACATGACTCAAAGAGATCTTGTGGCTGAGTATGAAGAACATGTTATGCATCTTAAACAAGAGCTACTATCTGATCTGAAGTCCAGAGGTTCTGAAATGGATAAACTGGAAGAAAGATTAGAGGAACACAGAGTCAAGATACAGGACTTGGAAGGTGGAAAGAAAGCGAGAGATGATCGCATCCGAGGGCTGGAGAGTCAAAAAAGAGCTTTGATCGAGAAGAGTGATTTGATGCAGCAACAGCTGCTAGGATACCAAGCACAGCTTAACAAGAGGAGACAAATGATGGAAGACCTTGAGCGTGACCATCAAAAAGAGATGGCTGCGCTGCAATCCCAGCTTGGACGTGCAAAAGATGAATGTGACGATACTGAAGATACTGTTCAACAGTTGAAGAGTTCATTAGAAGAAGCTCTTGCATCCAATAGGGAACAAGCCTCTGATATTGTCAAGGTGCAAGACGAACTCAGGAAGACACGTTCGTCTCTTCAGCGTCTTGAGGAAGAAAATGCCCATTTGCGGTTAGAATTGCAATCAAGAGATGATCTCATAAGAGCAGCAGAGGACGATCAAAGACAGCACTCAGAAGACATGACTAAAATGGAAGAGAGTTTAATAATGAAAGATGAGATCATCAGACAACTTGAAGAAGTGGGCAGGCGAACAGAAAATATCGAAGTGAGGAGACTTAAGGAGGATCTCAGAACAAGTAGGATGGAAATACAGTCGAATCTCGACGCCAGTCAATATCAGAAGGATGAGATAAGCCATCTTAATCAAAAACTGGATAGTAGCAAGAATGAAATTTCAAAGCTACAAGCTGAACTGTGCAGGAAGCAAGAGGAGGTGAAATTCATTCAAGACAATGACGTAAAACAGCTCCTTTCGGAAAATTCAAAGCTCAAAGAGAGAATTTCGTCAGGAGACGACGGTCATCAGGCCGAAGTCGAGGGAATGAAGGAACAGATCGCCAACATGACTGCGGAACTTCACAAAAGGGACACTGCAATGGCATCCATTACGGAAAGAGCTCAGCGGATGGAAAAAGATCTGCGAGAAACGACAGCTAAACACGACAGAGCAGCTGCTGAACTACAAGTAACGAACGCGCAGCTAGAAGCTTTGCGAATTGAAAACAGACATTTGCGTGACACTGCGCTTAATGAGCAGCTAACGGATTTATCTGATCTTTACAGTGGCAACCTGCAGCTCATTGGCCAACTTGAGGAAGACAACAGAAACTTGCGTACAGAGGTAGCCACGCTGCGCGAAGAACTAACAACTTTGGAAGCTAAATATCAAGAGAAGTATCGGAACGCTTTGAAAAAGAATCAGGATGTGCTGGCAGACATCAAGGATAACGAGTTCAGACGCCATAGCGAGCTGCGGTCAGAGTCTGAGCGCAAAGTGGCATCTTTAGAAGGTCGCCTTGAAGCTACGATAAGAAAATATGAGACTCAATTACACAGCCTACAAATGCAGAACGAACGATTGGCGAGTGAGGCATCGGAGCATCGAGACGGTGGTGCACCACGGCCTTTAATGTCCTCAACCAGCAAGGTCCTTCCTGAATATGTTCCCAGAAGGCCCGTTGATTTGAGTCACACCAGCACCACAAGCGGCTACACAGACACCGAAGCGTTGACGTACGCCGACCTAGCTGCAGGCCCAGCTCCTTCAGATACTGAGCGTGCTGCCACCCCAGTTGGTGCTAGGCGATCCTCCATTACATCGGATTTCTTGGCGGAGGAAAACCGGCGGGAAAAAGAACTGGAACAAATTCTGGAAAGACGAATAGCGGACTTGAAAACTAACACAGAATATATTCTGCAGAAATACACGTGA

Transcript

rna-Spis1502_mrna

ATGCGAGGAAGAACTCCGAGAGAGATGCCTTCAAAGACACTACAGttaatGCGGCAAATTGATCTTATGGTATCTGCCAAGAAAGCAGAATGGGAAACTCATGTGCATTCTGTTCAAATACAATTGGACAAGAAAACCAAAGAGCTGGAATTTGTTAAAGTTCAACTGGAGCAGAAGTGTCAGGAGGTTGGTGGGCTTGAACAGAAAGTGGATGAAATGGACATGACTCAAAGAGATCTTGTGGCTGAGTATGAAGAACATGTTATGCATCTTAAACAAGAGCTACTATCTGATCTGAAGTCCAGAGGTTCTGAAATGGATAAACTGGAAGAAAGATTAGAGGAACACAGAGTCAAGATACAGGACTTGGAAGGTGGAAAGAAAGCGAGAGATGATCGCATCCGAGGGCTGGAGAGTCAAAAAAGAGCTTTGATCGAGAAGAGTGATTTGATGCAGCAACAGCTGCTAGGATACCAAGCACAGCTTAACAAGAGGAGACAAATGATGGAAGACCTTGAGCGTGACCATCAAAAAGAGATGGCTGCGCTGCAATCCCAGCTTGGACGTGCAAAAGATGAATGTGACGATACTGAAGATACTGTTCAACAGTTGAAGAGTTCATTAGAAGAAGCTCTTGCATCCAATAGGGAACAAGCCTCTGATATTGTCAAGGTGCAAGACGAACTCAGGAAGACACGTTCGTCTCTTCAGCGTCTTGAGGAAGAAAATGCCCATTTGCGGTTAGAATTGCAATCAAGAGATGATCTCATAAGAGCAGCAGAGGACGATCAAAGACAGCACTCAGAAGACATGACTAAAATGGAAGAGAGTTTAATAATGAAAGATGAGATCATCAGACAACTTGAAGAAGTGGGCAGGCGAACAGAAAATATCGAAGTGAGGAGACTTAAGGAGGATCTCAGAACAAGTAGGATGGAAATACAGTCGAATCTCGACGCCAGTCAATATCAGAAGGATGAGATAAGCCATCTTAATCAAAAaCTGGATAGTAGCAAGAATGAAATTTCAAAGCTACAAGCTGAACTGTGCAGGAAGCAAGAGGAGGTGAAATTCATTCAAGACAATGACGTAAAACAGCTCCTTTCGGAAAATTCAAAGCTCAAAGAGAGAATTTCGTCAGGAGACGACGGTCATCAGGCCGAAGTCGAGGGAATGAAGGAACAGATCGCCAACATGACTGCGGAACTTCACAAAAGgGACACTGCAATGGCATCCATTACGGAAAGAGCTCAGCGGATGGAAAAAGATCTGCGAGAAACGACAGCTAAACACGACAGAGCAGCTGCTGAACTACAAgtaaCGAACGCGCAGCTAGAAGCTTTGCGAATTGAAAACAGACATTTGCGTGACACTGCGCTTAATGAGCAGCTAACGgatttATCTGATCTTTACAGTGGCAACCTGCAGCTCATTGGCCAACTTGAGgaaGACAACAGAAACTTGCGTACAGAGGTAGCCACGCTGCGCGAAGAACTAACAACTTTGGAAGCTAAATATCAAGAGAAGTATCGGAACGCTTTGAAAAAGAATCAGGATGTGCTGGCAGACATCAAGGATAACGAGTTCAGACGCCATAGCGAGCTGCGGTCAGAGTCTGAGCGCAAAGTGGCATCTTTAGAAGGTCGCCTTGAAGCTACGATAAGAAAATATGAGACTCAATTACACAGCCTACAAATGCAGAACGAACGATTGGCGAGTGAGGCATCGGAGCATCGAGACGGTGGTGCACCACGGCCTTTAATGTCCTCAACCAGCAAGGTCCTTCCTGAATATGTTCCCAGAAGGCCCGTTGATTTGAGTCACACCAGCACCACAAGCGGCTACACAGACACCGAAGCGTTGACGTACGCCGACCTAGCTGCAGGCCCAGCTCCTTCAGATACTGAGCGTGCTGCCACCCCAGTTGGTGCTAGGCGATCCTCCATTACATCGGATTTCTTGGCGGAGGAAAACCGGCGGGAAAAAGAACTGGAACAAATTCTGGAAAGACGAATAGCGGACTTGAAAACTAACACAGAATATATTCTGCAGAAATACACGTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17045 all species →	CEP63	Centrosomal protein of 63 kDa	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031470 all species →	Domain	Centrosomal protein Cep63/Deup1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18875 all species →	SARCOMA ANTIGEN NY-SAR-24/CYTOSKELETAL PROTEIN SOJO	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0007099 all species →	Biological Process	centriole replication	Interproscan
GO:0098535 all species →	Biological Process	de novo centriole assembly involved in multi-ciliated epithelial cell differentiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16763	CEP63; centrosomal protein CEP63	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.