Gene detail

Detailed information of PFX33688.1 in Stylophora pistillata

Genomic Location: Spis.scaffold9:1230706...1235092
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01176 all species →	eIF-1a	Translation initiation factor 1A / IF-1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006196 all species →	Domain	RNA-binding domain, S1, IF1 type	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR001253 all species →	Family	Translation initiation factor 1A (eIF-1A)	Interproscan
IPR018104 all species →	Conserved_site	Translation initiation factor 1A (eIF-1A), conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21668 all species →	EIF-1A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03236	EIF1A; translation initiation factor 1A	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.