Gene detail

Detailed information of PFX33881.1 in Stylophora pistillata

Genomic Location: Spis.scaffold8:1458382...1463831
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04005 all species →	Hus1	Hus1-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007150 all species →	Family	Checkpoint protein Hus1/Mec3	Interproscan
IPR046938 all species →	Homologous_superfamily	DNA clamp superfamily	Interproscan
IPR016580 all species →	Family	Cell cycle checkpoint, Hus1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12900 all species →	MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000077 all species →	Biological Process	DNA damage checkpoint signaling	Interproscan
GO:0030896 all species →	Cellular Component	checkpoint clamp complex	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0000723 all species →	Biological Process	telomere maintenance	Interproscan
GO:0000724 all species →	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0006289 all species →	Biological Process	nucleotide-excision repair	Interproscan
GO:0031573 all species →	Biological Process	mitotic intra-S DNA damage checkpoint signaling	Interproscan
GO:0033314 all species →	Biological Process	mitotic DNA replication checkpoint signaling	Interproscan
GO:0035861 all species →	Cellular Component	site of double-strand break	Interproscan
GO:0044778 all species →	Biological Process	meiotic DNA integrity checkpoint signaling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10903	HUS1; HUS1 checkpoint protein	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.