Gene detail

Detailed information of PFX34853.1 in Stylophora pistillata

Genomic Location: Spis.scaffold1:2733224...2757447
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis229_mrna

ATGGCAGCTGATGGAAAACGAACTACTTCCAAGAAGCTGATCAATGATCCTTTAGATGTGGTAGACGAGGCTTTAGAAGGAATCGTTCTAGCCAATCCTGGGCTAAAGTTACTAAAGAATCATCGGGTTATTATTCGAGAGGATGTAAACGAACTCCGAAAGGCAGGGAAGGTTACCCTCATTTCTGGAGGTGGAAGCGGTCACGAGCCATCTCATGCGGGATTTGTTGGAAAAGGAATGTTGACAGCGGCTGTGGCTGGAGCTGTTTTCACTTCTCCACCAACGAAATCCATCCTTGCTGCCATAAGAGCTGTCGGACACGGTAACAAGGGAGGAACGCTATTAATTGTCAAGAATTACACTGGTGACAGATTGAATTTCGGATTTGCCGCCGAGAGGGCGAAGGCTGAGGGGATAAAAGTCGATATGGTGGTAGTTGGAGAAGACTGCGCTCTCACTAGTAAGGACAAGACAGCAGGAAGGAGGGGGCTTTGTGGAACTGTGTTGATCCACAAGaTTGCAGGTGCATTGGCTGAAGAAGGCAAATCTCTTGAGGAAATCTCACAAGTGGCTAAAGCCACAGCTCAAGCTATGGGTACCATTGGTGTTAGTTTGGCTCCATGCAGTCTCCCCGGATCTTTACCATCTTTTGTGTTGGGCATTGATGAGATGGAGTTGGGACTCGGTATACACGGAGAACCAGGTGTCAAGAGGGTAAAGCTTGACAAGGTTGACCAAGTTGTCAAGACCATGATTGATCACATGACAGATGTTCAGGGTGGTGCAACATACAAGCTCAGTCTAAAGAAGGGTGACAGCATGGCTCTTGTGGTAAATAATCTTGGGGGAACATCTGTATTGGAGTTAAATATTGTTGCAAGAATGGCAATAACATACCTTACGCAAGGGAAAGAGGTGAAAGTTGATCGGGTTTATGTTGGAAGTTTGATGACCTCACTGGAAATGGCTGGAATATCAATCACTTTACTTCATTTGGACAAAACAAGGGCAGATTGTTTGGATCAAAGCACAACTGCACCAGCATGGCCACGAGTTTCAGTATCTAGAAATTCAGGCTGTATGAGAACTGACAAGCAGCCTCTTGAGGTTCCCATGGATGCTGTGGAGGACAAAAATGAGGCTCCCTCGGAAAAACTGACAGCACTAGGAGAAAAGGTCTATGCTGTAATTAGTCATGTAACTGATGCCCTCATTGCTGCTGAGGGTAAACTGAATGAGCTGGATAACCTTGCTGGCGACGGAGACTGTGGAACCACCCTTTCTCGAGGAGCTTCAGCCATAAAGAAAGTCTTAGGATCAAAGGATGCTCCAGGTTTGCCGTGTAACCAGCCAGAGGATCTGTTGTTATCACTTGCCAGTTTGTGCGAGGATCACATGGGTGGAAGTTCAGGCGTGTTCTACAGCCTTTTTCTCATGTCTGGAACAGTTCATCTGAGGGGTGACTCGGCTGCAAAGTCCTGGGCTCGAGCTTGGGAGGCTGGTGTCCAAGCCATCATGAGATATGGTGGAGCAGAGCCAGGGGACCGTACAATGCTCGACGCATTGCACCCAGCAGGATCAACTTTGATCTCAGAGCTCGATTCAGGTGTTGACCCACTGGAGGCAGTAGAAAAGGCTGTGGAGGCTGCTGAGGTCGGTGCCCAGTCCACTTCCGCTATGTCAGCCCGAGCCGGTCGATCCAGTTACGTTAGCGATAAGCACTTGAATAAGCCGGACCCAGGAGCATTGGCTGTGGCGGTCTGGTTCCGTGCGGCTTTTTATGCTCTGAAAAATTAGGAGATGATAGAAAGGAATTTTAATGATACTTCGTTGGACAAGATGATATGGAAAGAGAATGAACCAAATGTCTGCTGACCATTGATAGCAATATATGTTATATTTAAGGAGACTAAACAGTATACGCGATAAAAATAAATCTGTAATATTAAGGTATTTTTATATCAAATGGtattaaataaatttgtatCAATATCAACTTCTC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02734 all species →	Dak2	DAK2 domain	Family	Interproscan
PF02733 all species →	Dak1	Dak1 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036117 all species →	Homologous_superfamily	DhaL domain superfamily	Interproscan
IPR012734 all species →	Family	Dihydroxyacetone kinase	Interproscan
IPR004007 all species →	Domain	DhaL domain	Interproscan
IPR050861 all species →	Family	Dihydroxyacetone Kinase (DAK)	Interproscan
IPR004006 all species →	Domain	DhaK domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28629 all species →	TRIOKINASE/FMN CYCLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004371 all species →	Molecular Function	glycerone kinase activity	Interproscan
GO:0006071 all species →	Biological Process	glycerol metabolic process	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019563 all species →	Biological Process	glycerol catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00863	DAK, TKFC; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing)	EC:2.7.1.28 EC:2.7.1.29 EC:4.6.1.15	RIG-I-like receptor signaling pathway	ko04622	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.