Gene detail

Detailed information of PFX34889.1 in Stylophora pistillata

Genomic Location: Spis.scaffold1:1611837...1615289
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15328 all species →	GCOM2	Putative GRINL1B complex locus protein 2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026213 all species →	Family	DNA-directed RNA polymerase II subunit GRINL1	Interproscan
IPR051375 all species →	Family	Tuftelin/GRINL1A/MYZAP/CCD68	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23171 all species →	GDOWN1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003711 all species →	Molecular Function	transcription elongation factor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006368 all species →	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0005622 all species →	Cellular Component	intracellular anatomical structure	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21987	POLR2M, GRINL1A; DNA-directed RNA polymerase II subunit GRINL1A	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.