Gene detail

Detailed information of PFX34939.1 in Stylophora pistillata

Genomic Location: Spis.scaffold1:1849707...1866108
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

CEP120

ATGTCTCAAATGGAAGAGAAAGGGTATGACGGGAGAAGATTTCCTAAAAGACCACGACACAAGATCATTATCGAAACAAAGTTTGATGGAGAGACTCTGACTACAGATCCCATTGATCATGTGGAAACCCCCGAGTTCACTACAGAACTTGCCTGGGAATTGAACAAAAAGTCTTTGCACCAGCATCGCTTGCAGAGAACACCCATTAAAATTCAGTGTTATGCTCTGGATACTCTGTCATCTCAAAAGGAAGCTGTTGGTTATGTGATCTTAGATTTGCGGACAGCACAACAAAAACCAGCGAGGGCACAATGGTATTCCCTCCTGAGCACAAAGTACCAAAGAATGAAACCAGAGTTAAAGCTGATGTTGTCATTAGAAGATGACATTCAGTCTAAACAGACTGAGCAACAGTCACAACAAGATGACAGGCAGCACCCAAGACCTTCTCCACCAAGAAAACCAGCATCTGATGGGATACAGTGCATGCTGAATGAAGATCAAGGATATTATGAAATTGGGCCACAACATGAAGATGACAGGATTTTTATTTTGTCGGTCACAATTGGACTTGCCTCTAATTTAGCTAAGTTGGTACCATCTAGGTTTGCCTTGCCTGATCCAAACCTTGGTGGGGGATTTTATTTTTATTACTCATTGTTAAGCAATGATGTGACCAATGAAGTCTTTCATGATCTTCTTCAACCAAACTTTCCTGCTGAGCGAGCTTCAGTAAGAATCAGAAGTAACTTGGAACTTCTCAGAACATTTTTCACCCAACATTCAGGACTGGAGATCTATCTGTGCTGTGGGGACCAGTCCTTAGGCAAAGCTGCAGTCTCTTTTCAAGGCCTTCTCAATGAGCAACAAAATTTAGCCACCCCAGCTGTAATTGAAGGTTTATTTCCGTTAATTGCACCTGGTCATAGTCACCAATCCTCAGGCGTAGTAGATGACTCTGAGCCAGGAGTAGGTGTGTCTGTGTCTTTAAGACTAGAGCCACAGGAGACAATTGGGAATGTTGCCAGTGCCCCCTCGCCAATTGTTGCTGCAGGTGGAATGGGAAGACAGAGGGTACCTGAAGTAGACAACCTCCCATATGGAAGCAAATCTCCTGCTAAACAGCTTTCAAGCTCCCCTTCAAGAGGAAGACAGAGAGAGCCTGGGAGAGGGTCAGAGACAGAGATTGCTGGGGAGCACCCTAAGGGTACACCACCTCGACCACAATCCAGTACTCCACACAGTGATCCTGAAAAACCAGGGCTAGGAGGTGGGGTCCCTGTAGGGGCACGAAAGGAATCTCCTTCAAAAAAGTCAAAGAAGACAGCCCAGGCTCCTCAGTCACAAATACCAGCCCCAGGCCCCTTCAGCACTGTTCCTTTACTTGGTACCAGGCTACCAATTGATCCAGGAGCACACCACTTCTGTTTTTCTATTGACCTGCGCAGTATTTCCAATTTTGATGTAACATCTCCTGTTAACTGTTTCCTCAGGTACACATATCCCTTCTTTGGCAGTGCTGCACCTGTAATGACTAGTCCCCCGGTGCAAGTCCAACGCAACATGGAAGTTCTTCTACCAAAATCATTTTGTGCCTTTGACTTTGCGTCGTCGCCAGTACTTCTTCAACAGACTCTCACAAGAGTTCCCCTCATTATTGAGGTGTGGCATAAAGACAGCATGGCTGGAAATCTTCTGATTGGGGTTTCCAGTATGTCATTAGCCTCTGTCTTAAGTGCAAATAAAGTTCAAGTCTTGTCGCAGGGCAAAGAAGTGACCGGCCACAGGCAAATTTACAACGAGAGGGTGTTGATCTTTACTTCGGAAAAGCCTGCTCGGAGGATCGGTGAGCTTCATGTGGTTCTCGGTTTAGAGGACATGGGTCCAGTGAATATACAGCGCTTAATGGAGGCAAACGAGTACAGTCTTTCCTCTTCACTTGAAAGCAGCCAGACATCTAGTGCCATTCCTCTCTCTGAGCCGCAGCGTGTTCCACCCGCTCAGCCCAAGCCTCCTCCTGTTACCGACCCACGTGATACAGCAGAGTACAAGACCGCCCTAGAACTGGAACTTTGGAAAGAGCAACAGGAAGAGATGTTTCAAGCACAGATGCAAGATCGAGAAAACTCGCACATGAAAGCTCTTGCTGAGGAATGGAAAAGACGCGACAAAGAGCGTGAACTGATGGTTAAGAAAAAGCTGGAAGAATATTCAAGATTGGAAGACAAGATCAAACAGTCCATCGCTGACCTGGAAAGGCGAGAAAAACTGCTGTCCACAAATGAGGCTCAGGTGATGCACATGAAGGAAGAACTAGAACGAGAACACGAACGAAGGACGACAGAAATGAGAGAAGCTGCGCGGAGACTGAAAGATGACTGCTCACATCAAGTAGAAATGGAGAGGATGAAAGTCAAGGGCCTGGAAGAACAGAAACAGAGACTAGTGGAGCAGGTTTACGAAGCAGAGAAACGATATCAAGCAAAGGAGAATGAGTTTATGGCTTACAAGGAACAGCAGCTGACAAAACCTGAAGTGAAACTCGAGTCTGAAATAAATCTTTTAAGAATGGAAAAGACGGAACTTGAACGTAAGTTAGAAACTGCGAACAAGTCAAAGATCCACTACAAGCAGCAGTGGGGCCGAGCGCTGAGGGAACTGGCGCGACTGAAACAGCAAGAGCAGACAGCTGCCAGAGCGCGGCTAAAAAAACAAGAGCAAGAGCTGGAACACATGCGCCTGCGTTATCTTGCCGCTGAGGAGAAGGAGGTTGTTAAATCTGAGAAAGAGGAACTGGAAGAAATTAAACTTGAACTAGCCAGACTGAAACAGCAGGAAGAGGCGAAAGCTCGGGTGAATGAAGCGCCAACTGAAGGACAGGGAAGAAAATCAGATGCCAATTCTTCACTAAGAAGAAGCGTTAAGCATTCACCTGGACTCACATCTGTTCATGAACATGACGAGGAAGACATAGACAGCAGGATAGCAAAACTGATCGAGGAAAGAGACACGTTGTTACATACTGGAGTTTACACCACTGATGATCGGATTATAGTTGAACTAGATCGACAAATAAGAGACGCAATAGCCAGCAGGGGCACACCAGCGGAAAAAAGAGCAATCTTTCAAGAAGTGTGGACACTGACCTCCTCACCAGAGGACAAGGAACTCTTACCCGACAAGCAATGTCTAAAGGTCGACCGCTCCTCGACTAAAAGGGCGTTTGTGGCGAACTCTCCGTCTGAAAGAAAGCGATACACAATTACCTCTGCCGCTGTAAGAAGCTGCTTATACGAAAGAAAACAACCTGTGTCTGTTGACGTAGATAAACTACGAAGACAGAATTTTGAGGGCTTTAACAAGAAATTAGGTTGTTTTCTCTGTAAGATAGAATATTCAGTACCTTGTCCTTTACATGGTTTGCACCATTCGATGTTAACCCACAAAGCTCTGCAAGAGAGCAGAGCTGTGAGGTCACTTCCGCCGGAAGTGAGTTTCTGCAGATCGAGTGTCCCTGGGACTGAGTTAGGAGTTAGTACCAGGAAACACCTTCCTGCGGGCACCTGGATTGGGCCATTTGAAGGCCGGAGAATCCGACCAGAAGAGGTCAAATTAGGCATGGACACATCGTATATGTGGGAGATTTTCGCCGGAAGCAAATTAACTTGTTTCATTGACGGAAGTGATGAGGAGACATCAGGTTGGATGCGATTTATCCAGTGCGCACGCTCAAAAGATGAACAAAACCTTTACGCGTTTCAGCACAAGGGCGACGTATACTATCGGTCATTCAAAGACATTACCGTTGGTGAAGAACTTCTTGTCTGGTATGATGAACAATATTTACAGCACTTTGGAATACCGTTTGGATATCAGAACATGTCCTTGGTAAAAGATTTTGAAGATTCTCGGCCAATGGTAAAACAGCCGACAGAGGATAGCAAATCCGAGCGGAAAGCTGTGTATGCTCCTGCTAGTTTATTGCGTAGACAATTATCATCGGACAGCGATGCAGATGGTCAGCGGTCCTCTTCTAACAGTGACGTAGAAAGTGACGTTAATGACCCTGGAAATATACCGGTGCCCGTTCCCAAAAGTTCTCCGGAAAGGGAATTTACTACATGGCGGTGCCAGCAGTGTCGCAAGACCTTCACTCAGCGGGTGGCCCTGCAAATTCATGTTTGCCCATGCCAATCATCCAAGCCTTACCAGTGTGGCCAGTGCAGCTTGGCTTTTTCCTCTTCTTCTCAGCTCCGCGCGCATGTCACGTCGCATTCCAGTGAAAAACTTTTTAAATGTGGCTTCTGTTCGCGCGCTTTTGTCGGCGCGACAACACTAAACAATCACATTAAATCTCATTTCGGACAAAAGCCTTTTGGCTGTGATAAGTGCGGGAAAACATTTTGTCAGCCTGGACTTCTTTCTAGACACCAAAGAAATCCGCGCGAATGTAAAAGCACCCTGCCCATTTCAATCATCAAAAGCTAA

Transcript

rna-Spis159_mrna

ATGTCTCAAATGGAAGAGAAAGGGTATGACGGGAGAAGATTTCCTAAAAGACCACGACACAAGATCATTATCGAAACAAAGTTTGATGGAGAGACTCTGACTACAGATCCCATTGATCATGTGGAAACCCCCGAGTTCACTACAGAACTTGCCTGGGAATTGAACAAAAAGTCTTTGCACCAGCATCGCTTGCAGAGAACACCCATTAAAATTCAGTGTTATGCTCTGGATACTCTGTCATCTCAAAAGGAAGCTGTTGGTTATGTGATCTTAGATTTGCGGACAGCACAACAAAAACCAGCGAGGGCACAATGGTATTCCCTCCTGAGCACAAAGTACCAAAGAATGAAACCAGAGTTAAAGCTGATGTTGTCATTAGAAGATGACATTCAGTCTAAACAGACTGAGCAACAGTCACAACAAGATGACAGGCAGCACCCAAGACCTTCTCCACCAAGAAAACCAGCATCTGATGGGATACAGTGCATGCTGAATGAAGATCAAGGATATTATGAAATTGGGCCACAACATGAAGATGACAGGATTTTTATTTTGTCGGTCACAATTGGACTTGCCTCTAATTTAGCTAAGTTGGTACCATCTAGGTTTGCCTTGCCTGATCCAAACCTTGGTGggggattttatttttattactcaTTGTTAAGCAATGATGTGACCAATGAAGTCTTTCATGATCTTCTTCAACCAAACTTTCCTGCTGAGCGAGCTTCAGTAAGAATCAGAAGTAACTTGGAACTTCTCAGAACATTTTTCACCCAACATTCAGGACTGGAGATCTATCTGTGCTGTGGGGACCAGTCCTTAGGCAAAGCTGCAGTCTCTTTTCAAGGCCTTCTCAATGAGCAACAAAATTTAGCCACCCCAGCTGTAATTGAAGGTTTATTTCCGTTAATTGCACCTGGTCATAGTCACCAATCCTCAGGCGTAGTAGATGACTCTGAGCCAGGAGTAGGTGTGTCTGTGTCTTTAAGACTAGAGCCACAGGAGACAATTGGGAATGTTGCCAGTGCCCCCTCGCCAATTGTTGCTGCAGGTGGAATGGGAAGACAGAGGGTACCTGAAGTAGACAACCTCCCATATGGAAGCAAATCTCCTGCTAAACAGCTTTCAAGCTCCCCTTCAAGAGGAAGACAGAGAGAGCCTGGGAGAGGGTCAGAGACAGAGATTGCTGGGGAGCACCCTAAGGGTACACCACCTCGACCACAATCCAGTACTCCACACAGTGATCCTGAAAAACCAGGGCTAGGAGGTGGGGTCCCTGTAGGGGCACGAAAGGAATCTCCTTCAAAAAAGTCAAAGAAGACAGCCCAGGCTCCTCAGTCACAAATACCAGCCCCAGGCCCCTTCAGCACTGTTCCTTTACTTGGTACCAGGCTACCAATTGATCCAGGAGCACACCACTTCTGTTTTTCTATTGACCTGCGCAGTATTTCCAATTTTGATGTAACATCTCCTGTTAACTGTTTCCTCAGGTACACATATCCCTTCTTTGGCAGTGCTGCACCTGTAATGACTAGTCCCCCGGTGCAAGTCCAACGCAACATGGAAGTTCTTCTACCAAAATCATTTTGTGCCTTTGACTTTGCGTCGTCGCCAGTACTTCTTCAACAGACTCTCACAAGAGTTCCCCTCATTATTGAGGTGTGGCATAAAGACAGCATGGCTGGAAATCTTCTGATTGGGGTTTCCAGTATGTCATTAGCCTCTGTCTTAAGTGCAAATAAAGTTCAAGTCTTGTCGCAGGGCAAAGAAGTGACCGGCCACAGGCAAATTTACAACGAGAGGGTGTTGATCTTTACTTCGGAAAAGCCTGCTCGGAGGATCGGTGAGCTTCATGTGGTTCTCGGTTTAGAGGACATGGGTCCAGTGAATATACAGCGCTTAATGGAGGCAAACGAGtaCAGTCTTTCCTCTTCACTTGAAAGCAGCCAGACATCTAGTGCCATTCCTCTCTCTGAGCCGCAGCGTGTTCCACCCGCTCAGCCCAAGCCTCCTCCTGTTACCGACCCACGTGATACAGCAGAGTACAAGACCGCCCTAGAACTGGAACTTTGGAAAGAGCAACAGGAAGAGATGTTTCAAGCACAGATGCAAGATCGAGAAAACTCGCACATGAAAGCTCTTGCTGAGGAATGGAAAAGACGCGACAAAGAGCGTGAACTGATGGTTAAGAAAAAGctGGAAGAATATTCAAGATTGGAAGACAAGATCAAACAGTCCATCGCTGACCTGGAAAGGCGAGAAAAACTGCTGTCCACAAATGAGGCTCAGGTGATGCACATGAAGGAAGAACTAGAACGAGAACACGAACGAAGGACGACAGAAATGAGAGAAGCTGCGCGGAGACTGAAAGATGACTGCTCACATCAAGTAGAAATGGAGAGGATGAAAGTCAAGGGCCTGGAAGAACAGAAACAGAGACTAGTGGAGCAGGTTTACGAAGCAGAGAAACGATATCAAGCAAAGGAGAATGAGTTTATGGCTTACAAGGAACAGCAGCTGACAAAACCTGAAGTGAAACTCGAGTCTGAAATAAATCTTTTAAGAATGGAAAAGACGGAACTTGAACGTAAGTTAGAAACTGCGAACAAGTCAAAGATCCACTACAAGCAGCAGTGGGGCCGAGCGCTGAGGGAACTGGCGCGACTGAAACAGCAAGAGCAGACAGCTGCCAGAGCGCGGCTAAAAAAACAAGAGCAAGAGCTGGAACACATGCGCCTGCGTTATCTTGCCGCTGAGGAGAAGGAGGTTGTTAAATCTGAGAAAGAGGAACTGgaagaaattaaacttgaaCTAGCCAGACTGAAACAGCAGGAAGAGGCGAAAGCTCGGGTGAATGAAGCGCCAACTGAAGGACAGGGAAGAAAATCAGATGCCAATTCTTCACTAAGAAGAAGCGTTAAGCATTCACCTGGACTCACATCTGTTCATGAACATGACGAGGAAGACATAGACAGCAGGATAGCAAAACTGATCGAGGAAAGAGACACGTTGTTACATACTGGAGTTTACACCACTGATGATCGGATTATAGTTGAACTAGATCGACAAATAAGAGACGCAATAGCCAGCAGGGGCACACCAGCGGAAAAAAGAGCAATCTTTCAAGAAGTGTGGACACTGACCTCCTCACCAGAGGACAAGGAACTCTTACCCGACAAGCAATGTCTAAAGGTCGACCGCTCCTCGACTAAAAGGGCGTTTGTGGCGAACTCTCCGTCTGAAAGAAAGCGATACACAATTACCTCTGCCGCTGTAAGAAGCTGCTTATACGAAAGAAAACAACCTGTGTCTGTTGACGTAGATAAACTACGAAGACAGAATTTTGAGGGCTTTAACAAGAAATTAGgttgtTTTCTCTGTAAGATAGAATATTCAGTACCTTGTCCTTTACATGGTTTGCACCATTCGATGTTAACCCACAAAGCTCTGCAAGAGAGCAGAGCTGTGAGGTCACTTCCGCCGGAAGTGAGTTTCTGCAGATCGAGTGTCCCTGGGACTGAGTTAGGAGTTAGTACCAGGAAACACCTTCCTGCGGGCACCTGGATTGGGCCATTTGAAGGCCGGAGAATCCGACCAGAAGAGGTCAAATTAGGCATGGACACATCGTATATGTGGGAGattTTCGCCGGAAGCAAATTAACTTGTTTCATTGACGGAAGTGATGAGGAGACATCAGGTTGGATGCGATTTATCCAGTGCGCACGCTCAAAAGATGAACAAAACCTTTACGCGTTTCAGCACAAGGGCGACGTATACTATCGGTCATTCAAAGACATTACCGTTGGTGAAGAACTTCTTGTCTGGTATGATGAACAATATTTACAGCACTTTGGAATACCGTTTGGATATCAGAACATGTCCTTGGTAAAAGATTTTGAAGATTCTCGGCCAATGGTAAAACAGCCGACAGAGGATAGCAAATCCGAGCGGAAAGCTGTGTATGCTCCTGCTAGTTTATTGCGTAGACAATTATCATCGGACAGCGATGCAGATGGTCAGCGGTCCTCTTCTAACAGTGACGTAGAAAGTGACGTTAATGACCCTGGAAATATACCGGTGCCCGTTCCCAAAAGTTCTCCGGAAAGGGAATTTACTACATGGCGGTGCCAGCAGTGTCGCAAGACCTTCACTCAGCGGGTGGCCCTGCAAATTCATGTTTGCCCATGCCAATCATCCAAGCCTTACCAGTGTGGCCAGTGCAGCTTggctttttcctcttcttctcaGCTCCGCGCGCATGTCACGTCGCATTCCAgtgaaaaactttttaaatgtGGCTTCTGTTCGCGCGCTTTTGTCGGCGCGACAACACTAAACAATCACATTAAATCTCATTTCGGACAAAAGCCTTTTGGCTGTGATAAGTGCGGGAAAACATTTTGTCAGCCTGGACTTCTTTCTAGACACCAAAGAAATCCGCGCGAATGTAAAAGCACCCTGCCCATTTCAATCATCAAAAGCTAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF12416 all species →	DUF3668	Cep120 protein	Family	Interproscan
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF21549 all species →	PRDM2_PR	PR domain zinc finger protein 2, PR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR022136 all species →	Domain	Domain of unknown function DUF3668	Interproscan
IPR044417 all species →	Domain	PRDM7/PRDM9, PR/SET domain	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR001214 all species →	Domain	SET domain	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR039893 all species →	Family	Centrosomal protein of 120kDa-like	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21574 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042054 all species →	Molecular Function	histone methyltransferase activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0007098 all species →	Biological Process	centrosome cycle	Interproscan
GO:0022027 all species →	Biological Process	interkinetic nuclear migration	Interproscan
GO:1903724 all species →	Biological Process	positive regulation of centriole elongation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX34939.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.