Gene detail

Detailed information of PcrG000916.mRNA1 in Podabacia crustacea

Genomic Location: ptg000018l:2766023...2770782
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14833 all species →	NAD_binding_11	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	Domain	Interproscan
PF03446 all species →	NAD_binding_2	NAD binding domain of 6-phosphogluconate dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR013328 all species →	Homologous_superfamily	6-phosphogluconate dehydrogenase, domain 2	Interproscan
IPR008927 all species →	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR015815 all species →	Family	3-hydroxyisobutyrate dehydrogenase-related	Interproscan
IPR029154 all species →	Domain	3-hydroxyisobutyrate dehydrogenase-like, NAD-binding domain	Interproscan
IPR006115 all species →	Domain	6-phosphogluconate dehydrogenase, NADP-binding	Interproscan
IPR011548 all species →	Family	3-hydroxyisobutyrate dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22981 all species →	3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006574 all species →	Biological Process	valine catabolic process	Interproscan
GO:0008442 all species →	Molecular Function	3-hydroxyisobutyrate dehydrogenase activity	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan
GO:0050661 all species →	Molecular Function	NADP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PcrG000916.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.